Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03007 atggagcttcagctgggtctgggtcttcctgcaactccctctaaactcctggacctgaattcccgtgcccaggatccttggaacaacagaaaacgaacacacacccttatgattcctactactctttctctcctcccaagccaccaccactactgcgacggcgacgagggttggccacccctaaacaattggaggaagaaacttcgcgtaggaggagggaataataatgatgagatggtatgggttggtgcttcttgtgcgaccttagaagtaggagggtacatcaaggtcaagatggagggcgtggggattgcacggaaggttcatctccgcacgcaccaatcctttaaggcactcaaggaaaccttgatgaacatgtttggaaaatctcatcaacaatcaaacacctaccaactcgcttatcaggacaaagatggtgactggcttctcgcacaagatgtaccatggaggcaaaagtttcgttggctctgcacgacaactcaaattgctcaagaccaccacatgaatcttcactgcatatcaacttggtcgatcgccctagccttagaaagttag 576 0.0 MELQLGLGLPATPSKLLDLNSRAQDPWNNRKRTHTLMIPTTLSLLPSHHHYCDGDEGWPPLNNWRKKLRVGGGNNNDEMVWVGASCATLEVGGYIKVKMEGVGIARKVHLRTHQSFKALKETLMNMFGKSHQQSNTYQLAYQDKDGDWLLAQDVPWRQKFRWLCTTTQIAQDHHMNLHCISTWSIALALES 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03007 191 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 173 IPR003311 GO:0005634|GO:0006355
Pste6g03007 191 ProSiteProfiles PB1 domain profile. 92 172 IPR000270 GO:0005515
Pste6g03007 191 Gene3D - 93 178 - -
Pste6g03007 191 Pfam AUX/IAA family 133 157 IPR033389 -
Pste6g03007 191 Pfam AUX/IAA family 57 130 IPR033389 -
Pste6g03007 191 SUPERFAMILY CAD & PB1 domains 92 164 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03007 87 158 B3 DNA Binding Superfamily AT1G19850 32.895 4.91e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pste6g03007 AUX_IAA 1.1e-12 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03007 6 18013654 18014726 Pste6g03007 6 18013654 18014726 ECH