Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02970 atgaagaaggtgaggagaaagatcggtaagtatgaggtgggtcgaacaattggcgaaggcaccttcgccaaggttaagttcgctagaaacaccgagacaggggagagcgtcgccattaaagtgatggctaagaccaccattctccagcacagaatggttgaacagattaaaagagagatatccattatgaagattgtgaggcatcctaacatagttagattgcacgaggttttggctagccagacgaaaatctacataatccttgagtttgtaatgggaggggaactatacgataagattgttcagcagggaaagctttctataaatgaatctaggcgctactttcaacaactcatagatgctgttgatcattgtcatacaaagggtgtgtaccatagagacttgaagcctgaaaaccttcttcttgatgcttatggaaatttgaaggtttctgactttggattgagtgcattgactaaacagggtgttgaccttcttcacaccacttgtgggaccccaaattatgttgcccctgaggtgctcagtgatagaggatatgatggtgcagcagctgatgtttggtcatgtggtgtcatcctctatgttctaatggctgggtatcttccttttcatgaggcagaccttccaacactgtatagaagggtgaagtctattctaatagttcctatagctgagtcttggggctgggcaatagggttccccttcccttccctccatgtggcaacagtgctggactcgggtaagccagaccttctgatcactgctgcagaatttgtttgcccatattggttttctgatgaccaaaagtcattcatacaaaaaattctggatcctaaccctaaaacacgggtgaaaattgaagaaataaggaaagatccatggttccggaaaaactattttcccgtcaaacttggggaagatgagcaagtgaatttggatgatgtacaggctgtttttgatgatattgaggaccgatatgttgctgaacgggcagaaattactgagggaggtcctttgataatgaatgcatttgagatgattgccttgtcacaagggttgaatctttcaccgctatttgataggcatcaggattatgtaaagcggcaaactcgctttgtctcctgtaaaccagcaaaagttataatttcttctattgaagctgttgcagagtcaatgggtcttaaggtccattctcggaattacaaggtgaggcttgaaggtgtttctgcaaataaggttggacaatttgcagtggtcttggaggtgtttgaagttgcaccatcccttttcatggtcaatgttcggaaggcagctggggatatttttgactaccacaaggaaggggagtatgagttgtaa 1380 0.0 MKKVRRKIGKYEVGRTIGEGTFAKVKFARNTETGESVAIKVMAKTTILQHRMVEQIKREISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQQGKLSINESRRYFQQLIDAVDHCHTKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGVDLLHTTCGTPNYVAPEVLSDRGYDGAAADVWSCGVILYVLMAGYLPFHEADLPTLYRRVKSILIVPIAESWGWAIGFPFPSLHVATVLDSGKPDLLITAAEFVCPYWFSDDQKSFIQKILDPNPKTRVKIEEIRKDPWFRKNYFPVKLGEDEQVNLDDVQAVFDDIEDRYVAERAEITEGGPLIMNAFEMIALSQGLNLSPLFDRHQDYVKRQTRFVSCKPAKVIISSIEAVAESMGLKVHSRNYKVRLEGVSANKVGQFAVVLEVFEVAPSLFMVNVRKAAGDIFDYHKEGEYEL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02970 459 Pfam NAF domain 345 404 IPR004041 GO:0007165
Pste6g02970 459 ProSiteProfiles Protein kinase domain profile. 11 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02970 459 FunFam Non-specific serine/threonine protein kinase 4 229 - -
Pste6g02970 459 Gene3D Transferase(Phosphotransferase) domain 1 239 344 - -
Pste6g02970 459 Gene3D Transferase(Phosphotransferase) domain 1 2 232 - -
Pste6g02970 459 ProSiteProfiles NAF domain profile. 343 367 IPR018451 GO:0007165
Pste6g02970 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pste6g02970 459 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Pste6g02970 459 FunFam Non-specific serine/threonine protein kinase 343 457 - -
Pste6g02970 459 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Pste6g02970 459 Gene3D Kinase associated domain 1, KA1 345 457 - -
Pste6g02970 459 Pfam Protein kinase domain 11 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02970 459 SUPERFAMILY Protein kinase-like (PK-like) 8 319 IPR011009 -
Pste6g02970 459 CDD CIPK_C 349 453 - -
Pste6g02970 459 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 453 - -
Pste6g02970 459 SMART serkin_6 11 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02970 Pste-Chr6 17544889 17551935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02970 1 410 CBL-interacting serine-threonine protein kinases AT5G35410 66.341 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste6g02970 Pkinase 3.4e-71 CL0016