Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02870 atgttggtgccaatatctgtgtgcggcaaagaagagattgaactgtcaagagatggcagccactacagtctcaccactggtgttctaccttctctcggcgccaaaagcaaccgcagaatcaagctcaggcctttcattatatctccctatgaccgccgctacaggatatgggaaactttcctcattattctggttgtctacactgcttgggtttctccctttgaatttggatttctgaagaaaccacaagcacccctttccgtaactgataatgttgtcaatggattttttttcgtggatataattctgacattctttgtggcttacatcgacaaaaccacctatttgatcgtggatgaccgaaaacagattgcttggaaatatacaaggacttggttggccttcgatgttatctccatcattccttcagagctggtacagaagttatcaccttctcctcttcaatcttatggactattcaacatgcttcgcctttggcgtcttcgaagagtcagtgctttgttttctcggcttgagaaggacagaaactttaactatttttgggttcggtgtgctaagctcatttctgttaccctcttcgctgtccattgtgctgcatgtttctattatcttattgctgcacgatatcatgatcccaaaaagacatggattggtgcaacgatggataatttccttgaacgcagcttgtggtcaagatatgtgacatccatttactggtctattactaccttaacaactgttggttatggagatttgcatccagtgaattcaagggagatggtctttgacatcttttatatgctctttaatctggggttaactgcatatctgatcggtaatatgaccaacttggttgtccatggcacaagtcgaacaagaaaatttagggataccatacaagctgcctcaaattttgcccaaaggaaccaattgcctcatcggttgcaagaccaaatgcttgcccatttgtgtttgaagtatagaacagactcagaaggtttgcagcagcaagagacacttgattctcttcctaaagccatcagatcaagcatttcacattatcttttctattctctgattgataaggtttacttgtttcacggagtctccaatgacttgctctttcaattggtgtcagagatgaaagctgaatattttccacccaaggaagatgttatcttgcaaaacgaagcccccactgacttttatatattggtcactggtgccgtggttgttgaagaggccaaaactggtgatctttgtggtgagattggtgtgctttgttataagccacagcttttcactgttcgaaccaagcgactaagtcagttgctgaggctaaaccgtactacgttcttgaatattgttcaagccaacgtgggagacggaaccataatcatgaataatcttcttcagcatttgaaagatctcaacgatccaatcatggaggatgttttggtggatattgagaacatgttagctcgtggtaggatggacctaccagtgagtgtgtgttttgcggcagcaagaggagatgacttgttgttacatcaattgctcaaacggggcatggatccaaatgaatccgacaacaatcgaaggacagctttgcatatagcggcatctcaaggaaaagagaactgtgttatgcttctgttagattatggggcggatcccaacattagagatttggagggaaatgtggcactgtgggacgctatagtgggaggacatgagtcagtgaggaaggtgttagctgagaatggagcaaacttgcaatacggggatgtgggtcaatttgcatgctatgcggcagaacagaacagagtggagttgctgaaagaaatagtgcggtacggaggcgatatcacgcttggaaacaggagcaatgggaccacagccttgcacgttgcagtctcagaaggcaacgttgagatggtgaagttccttttggatcacggggcacgtattgacaaacgggataaccacggttggacacccagagaactagcagatcagcaatcacacatagaaatcaaagccatttttcactccactgaggagcctaaggctcaggcctcggttgctattcccgagaagcagagcagaatgaggtaccttggtaggttcactagtgagccaaccatgcctttaccccttgacggctcatttcgtggaactgatggctcttggagtcagagtcagagacagagccagagccagagccgtccaaggcgtaggagcaacaactaccataactcactctttgggataatgtcggcagcgcataacggggaaagagacctgcttttgtctgttgacatgaataacaatggtatgggtatgaagagtgataaggtagggccaactagagtaatagttagttgccctgagaagggtgaggttgttgggaagctggttttgctacctgcaacttttcaagagctacttcagattggagccaataaatttggtctctatcctgccaaggttgtgtgcaaagatggaggtgaaattgaagatatagaggtcattagagatggtgaccatcttgtttttgtcgctgctggtgccctgccataa 2604 0.0 MLVPISVCGKEEIELSRDGSHYSLTTGVLPSLGAKSNRRIKLRPFIISPYDRRYRIWETFLIILVVYTAWVSPFEFGFLKKPQAPLSVTDNVVNGFFFVDIILTFFVAYIDKTTYLIVDDRKQIAWKYTRTWLAFDVISIIPSELVQKLSPSPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNFNYFWVRCAKLISVTLFAVHCAACFYYLIAARYHDPKKTWIGATMDNFLERSLWSRYVTSIYWSITTLTTVGYGDLHPVNSREMVFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAQRNQLPHRLQDQMLAHLCLKYRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLIDKVYLFHGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVVVEEAKTGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLNDPIMEDVLVDIENMLARGRMDLPVSVCFAAARGDDLLLHQLLKRGMDPNESDNNRRTALHIAASQGKENCVMLLLDYGADPNIRDLEGNVALWDAIVGGHESVRKVLAENGANLQYGDVGQFACYAAEQNRVELLKEIVRYGGDITLGNRSNGTTALHVAVSEGNVEMVKFLLDHGARIDKRDNHGWTPRELADQQSHIEIKAIFHSTEEPKAQASVAIPEKQSRMRYLGRFTSEPTMPLPLDGSFRGTDGSWSQSQRQSQSQSRPRRRSNNYHNSLFGIMSAAHNGERDLLLSVDMNNNGMGMKSDKVGPTRVIVSCPEKGEVVGKLVLLPATFQELLQIGANKFGLYPAKVVCKDGGEIEDIEVIRDGDHLVFVAAGALP 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02870 867 SUPERFAMILY Voltage-gated potassium channels 49 293 - -
Pste6g02870 867 ProSiteProfiles Ankyrin repeat profile. 637 669 IPR002110 GO:0005515
Pste6g02870 867 CDD CAP_ED 372 466 IPR000595 -
Pste6g02870 867 ProSiteProfiles KHA domain profile. 798 867 IPR021789 -
Pste6g02870 867 SUPERFAMILY Ankyrin repeat 512 692 IPR036770 -
Pste6g02870 867 ProSiteProfiles Ankyrin repeat profile. 539 571 IPR002110 GO:0005515
Pste6g02870 867 SMART ANK_2a 572 601 IPR002110 GO:0005515
Pste6g02870 867 SMART ANK_2a 539 568 IPR002110 GO:0005515
Pste6g02870 867 SMART ANK_2a 603 632 IPR002110 GO:0005515
Pste6g02870 867 SMART ANK_2a 637 666 IPR002110 GO:0005515
Pste6g02870 867 SMART ANK_2a 506 535 IPR002110 GO:0005515
Pste6g02870 867 SUPERFAMILY cAMP-binding domain-like 297 481 IPR018490 -
Pste6g02870 867 Gene3D - 507 691 IPR036770 -
Pste6g02870 867 Gene3D Jelly Rolls 336 485 IPR014710 -
Pste6g02870 867 Pfam Ankyrin repeats (3 copies) 513 600 IPR002110 GO:0005515
Pste6g02870 867 Pfam Ankyrin repeats (3 copies) 610 686 IPR002110 GO:0005515
Pste6g02870 867 FunFam Potassium channel KAT2 360 485 - -
Pste6g02870 867 MobiDBLite consensus disorder prediction 717 758 - -
Pste6g02870 867 PANTHER POTASSIUM CHANNEL AKT1 20 861 IPR045319 GO:0005249|GO:0006813
Pste6g02870 867 PRINTS EAG/ELK/ERG potassium channel family signature 67 74 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste6g02870 867 PRINTS EAG/ELK/ERG potassium channel family signature 90 100 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste6g02870 867 PRINTS EAG/ELK/ERG potassium channel family signature 284 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste6g02870 867 PRINTS EAG/ELK/ERG potassium channel family signature 101 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste6g02870 867 PRINTS EAG/ELK/ERG potassium channel family signature 240 257 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste6g02870 867 PRINTS EAG/ELK/ERG potassium channel family signature 266 277 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste6g02870 867 Pfam Cyclic nucleotide-binding domain 392 465 IPR000595 -
Pste6g02870 867 ProSiteProfiles Ankyrin repeat region circular profile. 539 570 - -
Pste6g02870 867 Pfam Ion transport protein 55 299 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste6g02870 867 FunFam Potassium channel SKOR 55 293 - -
Pste6g02870 867 MobiDBLite consensus disorder prediction 733 758 - -
Pste6g02870 867 ProSiteProfiles cAMP/cGMP binding motif profile. 372 463 IPR000595 -
Pste6g02870 867 SMART cnmp_10 372 478 IPR000595 -
Pste6g02870 867 Gene3D - 56 293 - -
Pste6g02870 867 ProSiteProfiles Ankyrin repeat region circular profile. 637 669 - -
Pste6g02870 867 Pfam KHA, dimerisation domain of potassium ion channel 798 860 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02870 Pste-Chr6 16462330 16469455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02870 15 860 Ion Channels AT2G25600 62.442 0.0 1085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02870 6 16462330 16469455 Pste6g02870 6 16462330 16469455 ECH