Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02866 atgaaaggggaagtgcagcttcagcctccaacggttttgcaaaacccaagtgattcggaccctttgctccataaccaggaggaggatgagtcacccggaagctccggtgagatcaaggatgaggaagaagacgttgaggctggtttactcccctgttgtcgaatttgcctcgaaagcgaatctgacccagaggatgaattgatatctccatgcatgtgcaaagggacccaacagtttgtccatcgtttgtgtctggatcattggcgctcagtaaaggatttgccttctcacactgtaccacctgcaaagcccaatttcatcttagagttgaatcatttgaggacaactcttggcgtaaagtaa 363 0.0 MKGEVQLQPPTVLQNPSDSDPLLHNQEEDESPGSSGEIKDEEEDVEAGLLPCCRICLESESDPEDELISPCMCKGTQQFVHRLCLDHWRSVKDLPSHTVPPAKPNFILELNHLRTTLGVK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02866 120 Pfam RING-variant domain 53 90 IPR011016 GO:0008270
Pste6g02866 120 CDD RING_CH-C4HC3_MARCH 53 98 - -
Pste6g02866 120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 110 IPR013083 -
Pste6g02866 120 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 10 93 - -
Pste6g02866 120 SUPERFAMILY RING/U-box 51 92 - -
Pste6g02866 120 ProSiteProfiles Zinc finger RING-CH-type profile. 45 109 IPR011016 GO:0008270
Pste6g02866 120 SMART ringv_2 52 96 IPR011016 GO:0008270
Pste6g02866 120 MobiDBLite consensus disorder prediction 1 44 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02866 1 93 C3H Transcription Factor Family AT1G11020 58.654 2.48e-27 100