Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02859 atgaatcggcctgatgcaccacccagagaagtggataaatcccctggttctgtcagaactgttgcctggcttcatagtgatcagacaatattgagttcatgtactgatatgggaggtgtcaggttatgggatgtaagaagtggtaaaatagtccagacacttgaaactaagtcgtctgtgacaagtgctgaagtgagtcaggatggccgttatattacaactgctgacggttctactgtaaagttttgggatgcaaattactatggattggttaagagctatgatatgccctgcactgtggaatccgtttcactggagcctaagtatgggaacaagttcgttgctgggggagaagatatgtggcttcatgtgtttgatttccatacagggaatgagattgcatgtaataagggtcatcatggtcctgtccactgtgttcgtttttctcctggtggagaatcctatgcgtctggatctgaggatggaaccatcagaatatggcagactggcccgttgactcttgatgactcggagactgtgtctgcaaatggttcagttgataaagtgaaggtaactgcagacgaggtttcacgcaagattgagggttttcatattgcagatgacggaaaaactaaagaaaaggatgaggctgtggaggaaacaagctaa 669 0.0 MNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANYYGLVKSYDMPCTVESVSLEPKYGNKFVAGGEDMWLHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTLDDSETVSANGSVDKVKVTADEVSRKIEGFHIADDGKTKEKDEAVEETS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02859 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 211 - -
Pste6g02859 222 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 11 170 IPR011047 -
Pste6g02859 222 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 136 168 - -
Pste6g02859 222 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 168 IPR001680 GO:0005515
Pste6g02859 222 Pfam WD domain, G-beta repeat 49 84 IPR001680 GO:0005515
Pste6g02859 222 Pfam WD domain, G-beta repeat 134 167 IPR001680 GO:0005515
Pste6g02859 222 Gene3D - 8 217 IPR015943 GO:0005515
Pste6g02859 222 SMART WD40_4 129 168 IPR001680 GO:0005515
Pste6g02859 222 SMART WD40_4 87 126 IPR001680 GO:0005515
Pste6g02859 222 SMART WD40_4 47 84 IPR001680 GO:0005515
Pste6g02859 222 SMART WD40_4 4 44 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02859 18 166 Eukaryotic Initiation Factors Gene Family AT2G46290 28.743 1.30e-18 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02859 6 16402684 16404025 Pste6g02859 6 16402684 16404025 ECH