Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02853 atgaaggatccagtggatgatgatcgagtaaaatgtaggagtactctgcagaaacccaaagaccttagaagaagagatagaagaagaagccaatgcaaacaagagagattacaagaaacaagacttgactcacaactggtttcctctgcttgcaaaagtcttgtgtttcctgccaggcctggctatggccagctggggacaaagtgtctggttaaagccaaccacttcctggcagacatatcagcatctgacttgagccattacaatgttaaaataacacctgaggttacttctcgtaaaacaagcaaagctatcatagctgagttagtgaggcttcacaggaacactgacttggggctgaggcttcctgtttatgacggaagaagaaatctctacacagctggcttgcttccttttgaatacaaagagttcaccataatattgagcgaggatgatgagggcactggttctaccagggaaagagaatttgaagtggcgatcacgtttgcagcttgtgttagcatgcgtcaattacgtgagcttctcagtgggaaacaagtggacaccccacaagaggcgcttactgtcattgacattgtattgagggagcttgcagctcagagctacgtatcagtcgggaggtttctctattctccagatttaagaaaaccacagcagctaggtggtggcctggaatcatggcgcggcttctaccagagtataaggccaactcagatgggattgtcacttaatattgacatgtcatcaatggcgtttattgaaccacttcctgtaattgacttcgttgctcaaattttgggaaaagatgtgctcacaaagccattgtcagatgtagatcgtgtcaagattaagaaagccttaagaggtgtgaaagttgaagttacacatagaggaagttttcgaaggaagtaccggattataggattgacatcacagcctacaagggagctcaatttccctgtagatgagaaaatgaacatgaaatcagtagttgattactttcaagaaatgtatggatatacaatcatatattctcatctaccctgccttcaagtaggaagccaaaagaaagtgaactatttgcctatggaggcttgtaagatagttggaggtcagagatatacaaaagggcttaacgaaaagcagataacttctttgctaaaggtctcgtgccagcgaccacgtgaacaagagacagatattcttcagacaattcaacaaaatgagtatgagtataatccctatgcaaaggagttcagtatccgcattgacagcaagcttgcgtcagttgaggctcgggttcttcctgctccatggttgaaatatcatgacactggaagggagaaagaatacttgccacaagttggtcaatggaacatgatgaacaaggaatttagtccggatccagtgatacctgtacattcagcaagacctgatctggtaaagaaagccttgaagtatgtacattatgctgtacttgataaacttggcgggaaagaacttgagttgctgattgccattcttccagacaacaatggctctctgtatggtatgatccctagtaactacaataagtccagtctattagcatcacttcatgagcatagctaccatggtgatctaaaaagaatctgcgaaacagatctggggttgatttctcagtgctgtcttacaaaacacgtatttaagatcaatagacagtatttagcaaatgtggcactaaagatcaatgtgaagctgggaggaaggaacacagtacttttggatgccctaagttggaggatcccattggttagtgacattccaacaataatttttggagctgatgtaacgcatccagaatctagagaggacccttgtccatccattgctgctgttgtagcctcccaggactggccggaagtaacaaaatatgcaggattagtatgtgctcagcctcatcgggaggaactcattcaagatctttataaatgttggaaggatcctcatcatggtatagtttatggtggcatgatcagagagctgttactctcttttaagaaggcaaccggacaaaaaccattgaggataatattttacagggatggggtaagtgaaggacagttctaccaggttttgttgtatgagcttgatgccatccgtaaggcttgtgcttctttggaacccagttaccaacctccggtaacatttgtcgtcgttcaaaagcggcatcacactagactcttctcaaacaatcatgatgacagaaacagcactgataagagcgggaatatcttacctggtactgtggtggattctaagatctgccatcctacggaatttgacttctatttatgcagccatgcgggaattcagggtacaagtagaccagcccattatcatgtactgtgggacgagaacaatttcactgctgatgagattcaatctctgaccaacaacttgtgctacacctatgcaagatgtacacgatctgtttccgtagtgcctcctgcgtactatgctcacttggcagcttacagagctcgattctacatggaacctgatgtgcatgagattgctaaatctcgaggtgcaagatcaaaagatgagtcagttcggccattgccagctctgaaagagaaggtgcagcagtga 2655 0.0 MKDPVDDDRVKCRSTLQKPKDLRRRDRRRSQCKQERLQETRLDSQLVSSACKSLVFPARPGYGQLGTKCLVKANHFLADISASDLSHYNVKITPEVTSRKTSKAIIAELVRLHRNTDLGLRLPVYDGRRNLYTAGLLPFEYKEFTIILSEDDEGTGSTREREFEVAITFAACVSMRQLRELLSGKQVDTPQEALTVIDIVLRELAAQSYVSVGRFLYSPDLRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVLTKPLSDVDRVKIKKALRGVKVEVTHRGSFRRKYRIIGLTSQPTRELNFPVDEKMNMKSVVDYFQEMYGYTIIYSHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETDILQTIQQNEYEYNPYAKEFSIRIDSKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKEFSPDPVIPVHSARPDLVKKALKYVHYAVLDKLGGKELELLIAILPDNNGSLYGMIPSNYNKSSLLASLHEHSYHGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKLGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESREDPCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLYKCWKDPHHGIVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHEIAKSRGARSKDESVRPLPALKEKVQQ 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02853 884 Gene3D paz domain 257 381 - -
Pste6g02853 884 Pfam PAZ domain 286 393 IPR003100 GO:0005515
Pste6g02853 884 MobiDBLite consensus disorder prediction 862 884 - -
Pste6g02853 884 FunFam protein argonaute 10-like 601 884 - -
Pste6g02853 884 SMART PAZ_2_a_3 267 399 IPR003100 GO:0005515
Pste6g02853 884 SUPERFAMILY PAZ domain 258 417 IPR036085 GO:0005515
Pste6g02853 884 MobiDBLite consensus disorder prediction 1 21 - -
Pste6g02853 884 CDD Piwi_ago-like 421 852 IPR045246 -
Pste6g02853 884 ProSiteProfiles PAZ domain profile. 263 377 IPR003100 GO:0005515
Pste6g02853 884 Pfam Piwi domain 545 852 IPR003165 GO:0003676
Pste6g02853 884 FunFam Protein argonaute-2 256 382 - -
Pste6g02853 884 SUPERFAMILY Ribonuclease H-like 499 854 IPR012337 -
Pste6g02853 884 CDD PAZ_argonaute_like 262 376 - -
Pste6g02853 884 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 59 854 - -
Pste6g02853 884 SMART Piwi_a_2 521 853 IPR003165 GO:0003676
Pste6g02853 884 Gene3D - 601 884 IPR036397 GO:0003676
Pste6g02853 884 Gene3D - 460 594 - -
Pste6g02853 884 Pfam N-terminal domain of argonaute 68 201 IPR032474 -
Pste6g02853 884 SMART DUF1785_2 210 262 IPR014811 -
Pste6g02853 884 ProSiteProfiles Piwi domain profile. 510 853 IPR003165 GO:0003676
Pste6g02853 884 MobiDBLite consensus disorder prediction 1 35 - -
Pste6g02853 884 Pfam Argonaute linker 1 domain 211 260 IPR014811 -
Pste6g02853 884 Pfam Argonaute linker 2 domain 405 449 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02853 Pste-Chr6 16341150 16348678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02853 42 884 Eukaryotic Initiation Factors Gene Family AT5G43810 68.610 0.0 1278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02853 6 16341150 16348678 Pste6g02853 6 16341150 16348678 ECH
Pste6g02853 6 16341150 16348678 Pste2g00261 2 1667151 1678609 PCT