Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02849 atggcgctgctgattgttgtggtgttcttgctgcagctgagttggagcatccaagtgaagtcggagcccactcaggagaagcaagccctccttgctttcatctccaaaacccgccactcgaaccgcctccaatggaatgcttccgattcagtgtgcgactgggtgggcgtgaaatgcgacgcctcacagtccttcgtgtactcactccgtttgcccgccgtggacctggtgggtccggtcccacccgacacaatcagtcgcttgtcacagctgaggatcctcagtctccgctccaacggcctcaccggcgagatcccttccgatttttctaacctcaccttcctccgcagcctctacctccagaaaaacgacttctccggtcagttccctgccactctcactcgcctcactcgtttagttcgtctggatctctcttccaacaacttcaccggtcaaatccctttctctctcaacaacttaacccacctcactggcctcttcttggaaaacaacaccttctccggccaaatcccaaacatcaactccaacctcgttaacttcaatgtttcctttaaccgtctcaacggttccatccctcgcacactctctcacttcccggaaacctcattcgccggtaacatagatctctgtggtccgccgctcaagccctgcaaccctttcttcccggctccggcaccgtccccctccgccaattttaaacccgccccgccgcataacaactccaaaagtctctccaacggcgccattgtcgctatcgttttgggctcagttctcgctctagctttgctgctgctgcttctgctgctatgtctccggcggcggcggaggcaacccgccaaaccgccgaagcccgtggctgcgacgcgtgccgtgcccacggaggccggaacttcatcgtcgaaggaggacatcaccgggggttcggcggaggcggagaggaacaggcttgtcttcttcgaagggggaatatacagtttcgatttggaggatttgttgagggcttcggcggaggtgttggggaagggtagcgtcgggacttcctataaggcggtgctggaggaagggactaccgtggtggtcaaaaggctcaaagatgttgtggtgaccaagaaagagttcgagacgcaaatggaggttctgggaaggattaagcacgagaatgtggttcctctcagagccttttacttctccaaggacgagaaattgctcgtttacgattacatgtcttctggtagcttgtctgctctcctacacgggagcagaggatctgggcgaacaccactagattgggacagccggatgagaatagcagtgggagccgcaagagggctggcatgtctccacgtggcaggcaaagtggtccatggcaacataaaatcttcgaacatcctcctccgaggaccggatcacgaagccggcgtatcggactttgggctgaacccattgttcggaaacggagccccgtcgaaccgggtggcgggttaccgggcaccggaagtggtagaaacccgaaaggtgagcttcaagtcagacgtgtacagcttaggcgtgttgctgttggagcttctgacggggaaagcaccgaaccaggcgtctctcggggaagaggggattgatcttccgaggtgggtgcagtcggtggtgcgggaagagtggacggcggaggtgttcgacgcggagctgatgaggtaccataacatcgaggaggagatggttcagctgttgcaaatagcgatggcatgtgtgtcggtggtgcctgatcagaggcccaatatgcaggacgtggtgcgcatgattgaggacattaaccggggcgagaccgatgacggcttgcgtcagtcatcggatgacccttccaaaggatccgagggtcatacgcctcccccagagtcaaggtcactcacaccataa 1932 0.0 MALLIVVVFLLQLSWSIQVKSEPTQEKQALLAFISKTRHSNRLQWNASDSVCDWVGVKCDASQSFVYSLRLPAVDLVGPVPPDTISRLSQLRILSLRSNGLTGEIPSDFSNLTFLRSLYLQKNDFSGQFPATLTRLTRLVRLDLSSNNFTGQIPFSLNNLTHLTGLFLENNTFSGQIPNINSNLVNFNVSFNRLNGSIPRTLSHFPETSFAGNIDLCGPPLKPCNPFFPAPAPSPSANFKPAPPHNNSKSLSNGAIVAIVLGSVLALALLLLLLLLCLRRRRRQPAKPPKPVAATRAVPTEAGTSSSKEDITGGSAEAERNRLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEVLGRIKHENVVPLRAFYFSKDEKLLVYDYMSSGSLSALLHGSRGSGRTPLDWDSRMRIAVGAARGLACLHVAGKVVHGNIKSSNILLRGPDHEAGVSDFGLNPLFGNGAPSNRVAGYRAPEVVETRKVSFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPNMQDVVRMIEDINRGETDDGLRQSSDDPSKGSEGHTPPPESRSLTP 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02849 643 Gene3D Transferase(Phosphotransferase) domain 1 415 627 - -
Pste6g02849 643 ProSiteProfiles Protein kinase domain profile. 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02849 643 MobiDBLite consensus disorder prediction 609 626 - -
Pste6g02849 643 Gene3D Phosphorylase Kinase; domain 1 307 414 - -
Pste6g02849 643 Pfam Protein kinase domain 343 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02849 643 FunFam pollen receptor-like kinase 1 309 414 - -
Pste6g02849 643 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Pste6g02849 643 MobiDBLite consensus disorder prediction 286 314 - -
Pste6g02849 643 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Pste6g02849 643 MobiDBLite consensus disorder prediction 609 643 - -
Pste6g02849 643 PANTHER OS05G0588300 PROTEIN 5 622 - -
Pste6g02849 643 Gene3D Ribonuclease Inhibitor 183 224 IPR032675 -
Pste6g02849 643 SUPERFAMILY L domain-like 45 219 - -
Pste6g02849 643 SUPERFAMILY Protein kinase-like (PK-like) 344 609 IPR011009 -
Pste6g02849 643 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 415 620 - -
Pste6g02849 643 FunFam Probable inactive receptor kinase RLK902 23 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02849 Pste-Chr6 16223492 16226831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02849 26 627 Receptor kinase-like Gene Family AT5G58300 53.028 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste6g02849 Pkinase 2.9e-36 CL0016