Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02846 atgtcatgcagattgaatgctttgtgtttgttagacttgacattgcctagctttgatttgtatctgcatcatccccagttagatttatacattcacgactatcttatcaagagacaattgcatgctaccgcaagagtatttcaggctgaaggaaatgtttcaatggatcctgttgttatagatgcccctagtggttttctctttgagtggtggtctgtcttctgggacatatatattgccagggcaaatcagaagcactcagaaacagcaacatcttacagtaagggtcaacaaattaaggctcgactcatgcagaagcaacaagagcaagagcttcagaatacaaaccagaatcaacaactgcaactcttactgcaaagacgtgctcagcagcagcaacgtctgagtggaactcaacttatcaatggcaacactggctgtcctattagcaatgatcctttgatgaggcagagccgggcaacttctaatgctatggcaggaaaaacatatgaggagaggttaaagcttccacttcagagagatgctttggatgatgcaagcattaagcaaaaagtagctgatgatgttggtcagtttctaaacccaaaccatgccttattgatgaaagcagtggcaacaactggtgaacaggctacaggacagacattgctcagtgcacctagcattttgcaggggaatattcaacatgttcaaaatatgaatctgaaacttccagggtctgcacaagacataaagagtgatatgaatgcaatgatgaggtctcaagctgttgtttcacaaggatcctttattggttgtcatggaaatacaatttatttgagttattccgttgactga 858 0.0 MSCRLNALCLLDLTLPSFDLYLHHPQLDLYIHDYLIKRQLHATARVFQAEGNVSMDPVVIDAPSGFLFEWWSVFWDIYIARANQKHSETATSYSKGQQIKARLMQKQQEQELQNTNQNQQLQLLLQRRAQQQQRLSGTQLINGNTGCPISNDPLMRQSRATSNAMAGKTYEERLKLPLQRDALDDASIKQKVADDVGQFLNPNHALLMKAVATTGEQATGQTLLSAPSILQGNIQHVQNMNLKLPGSAQDIKSDMNAMMRSQAVVSQGSFIGCHGNTIYLSYSVD 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02846 285 Coils Coil 100 134 - -
Pste6g02846 285 SMART Lish 23 55 IPR006594 GO:0005515
Pste6g02846 285 ProSiteProfiles LIS1 homology (LisH) motif profile. 23 55 IPR006594 GO:0005515
Pste6g02846 285 PANTHER TRANSCRIPTION ACTIVATOR MSS11 26 103 - -
Pste6g02846 285 Pfam LisH 26 51 IPR006594 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste6g02846 Pste-Chr6 16163112 16166917 Dispersed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Pste6g02846 LisH 2.2e-06 CL0561