Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02839 atgacagggaacattacatacaatggacatagtctcagagagtttgttcctcagagaactgctgcttatgtcagccaacaagattggcatgtggcagagatgaccgtaagggaaactctccagtttgctggtcgctgtcaaggcgtcggatttaaatttgatatgttggtggagctcgccagaagagaaaagaatgctggaataaaaccagatgaggatcttgatctattcatgaagtcattagctctcgggggacaggaaacaaatcttgtggtggagtacatcatgaagtttttagttcattttggatcttccaaactccgaagtactaaaatatttctcacaaagatattaggtttggacatatgcggtgacacattggtgggagatgaaatgctcaagggcatctcaggggggcaaaagaagcggcttacaacaggtgaattattgattggaccagcaagagtgctgttcatggatgagatatcaactggtcttgatagttcaactacgtatcaaattatcagatatcttaagcattcaactcatgcacttgatgggaccacaattgtatctcttcttcaaccagctccagagacctatgaattgtttgatgatgttattcttttgtgcgagggtcagattgtatatcaggggccccgtgaagatgctgttgatttttttaaacaaatgggattcaattgtcctgagagaaaaaatgtagcagatttcttacaagaagttacgtcaaagaaggaccaagagcaatactggtctattatcgatcgcccttaccgatacgtaccagttgggaagttcgcagaagcattttccttttatcgtcagggaagagttttgtctgacgaactaaatacacctttcgatagacgctataaccatcccgccgccttggcaactcttagctatggctcgaaaaggctccaacttctaaggactaatttccagtggcagaagcttcttatgaaacggaattcatttatttatgtttttaaatttgttcagctgtttttagttgccttaattacaatgagtgttttcttccgaacaacgatgcaccgcaatacaattgacgatggaggcttatatcttggagctctgtatttctctatggttattattctttttaatggttttaccgaggtgtcaatgttagttgcaaagcttccagttctttacaagcacagagacttgcacttctatcctagctgggcatatacactcccttcttggctccttagtatcccaacttccataatagaggctggatgctgggtggcggtctcatactatgcaagtggatatgatcctgcatttactagatttttgcggcagttcctgctttttttctttctgcatcagatgtctatagaccgtattcctgtttggtggatatggggtttttggatttctcctttgatgtatgcacaaaattcagcttctgtgaacgagttccttggacattcttgggctaagatagttggaaatcagaccaccgattcattgggtaaggcagtattaaaagagcgaagtttgtatgcagaaagctattggtattggattggtttaggggcaatggttggatacacaattttgttcaatattctattcacaatcttcttggcttatcttaatcccttgggaagacaacaagctgtagtttcaaaagatgaactgcaagaaagagaaaggagaagaaaaggtgaaagtgttgttattgagctgagagagtacttgcagcgttcggcgtcaagcggaaagcattttaagcaaagaggaatggttctcccatttcaaccactttccatggctttcagcaatatcaattactacgtggatgtccctttggaattgaaacaacaagggatattagagaacagactacagctgcttgttaatgttaccggagcctttaggcctggtgtgttgacagcattggtcggagtaagtggtgctggaaaaacgacgctgatggatgtgttagctggaagaaaaactggtggtgtcatagaagggggtatatacatatctggttatctcaaaaggcaagactcttttgcccgaatatctggttactgtgagcaaactgacgttcattcaccttgtttgactgtctgggaatccttactgttctctgcttggcttcgattatcttcagatgttgacttaaacactcaaaaggccttcgttgaggagataatggagcttgtggagctcactccgttaagtggagcactagtgggtctacctggaattgatggtctgtcaactgaacagcggaaaaggttgactatagcagtggaactggttgccaacccttctatagtcttcatggatgaacccacttctggattggatgcccgggctgcagccattgtgatgagaactgtgaggaatatagtaaatactggtcgaacaattgtgtgcacaatccatcagcctagcatagacatatttgaatcctttgatgagcttctgtttatgaaaaggggaggagagcttatttatgctggtccacttggccctaagtctagtgaactaatcagctatttcgaggcaatcgaaggagttccaaagatcaggtctggatataaccctgctacgtggatgctggaggttacttcttcaacggaagaaagccgactcggagtggacttcgcagaaatctaccgaagctcaagtttatatcaatataaccaagagttggttgaaaggttgagcaagccaagtggaaattcaaaagaattgcattttccaaccaagtattgtcggtcatcttttgagcagttcctaacttgtctctggaagcaaaatctttcttactggcgtaaccctcagtacactgctgttcgcttcttttacactgtcataatttcattgatgcttgggtcgatatgctggagatttggtgctaaaagggagtcgcagcaagatctattcaatgccatgggatccatgtattcggcaatcctcttcattggtataacaaatggcacagctgttcagcctgttgtttccgtggaaagatttgtttcttatagagaaagagctgcggggatgtattcggctttatcatttgcatttgctcaggttgtgattgagtttccctatgtgttcgcacaggctatgatatactcttcaatattctattccatgggttcctttgtctggactttagataggtttatatggtacttattcttcatgtattttacaatgttatactttaccttctatggaatgatgacaacggctgtcacaccaaatcataatgttgctgccatcattgctgctccattttatatgttgtggaaccttttcagtggttttatgattcctcataagagaatccctctttggtggagatggtattactgggcaaaccctgtagcatggagtctgtatggtctcctaacttcacagtatggtggtgataatcatttggtgaagctctctaatggaaacttgatgactataacacagttatatttgcctttgcaattaaatccttcaatttccaaaggagatgatgggatagcaagctag 3564 0.0 MTGNITYNGHSLREFVPQRTAAYVSQQDWHVAEMTVRETLQFAGRCQGVGFKFDMLVELARREKNAGIKPDEDLDLFMKSLALGGQETNLVVEYIMKFLVHFGSSKLRSTKIFLTKILGLDICGDTLVGDEMLKGISGGQKKRLTTGELLIGPARVLFMDEISTGLDSSTTYQIIRYLKHSTHALDGTTIVSLLQPAPETYELFDDVILLCEGQIVYQGPREDAVDFFKQMGFNCPERKNVADFLQEVTSKKDQEQYWSIIDRPYRYVPVGKFAEAFSFYRQGRVLSDELNTPFDRRYNHPAALATLSYGSKRLQLLRTNFQWQKLLMKRNSFIYVFKFVQLFLVALITMSVFFRTTMHRNTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWAYTLPSWLLSIPTSIIEAGCWVAVSYYASGYDPAFTRFLRQFLLFFFLHQMSIDRIPVWWIWGFWISPLMYAQNSASVNEFLGHSWAKIVGNQTTDSLGKAVLKERSLYAESYWYWIGLGAMVGYTILFNILFTIFLAYLNPLGRQQAVVSKDELQERERRRKGESVVIELREYLQRSASSGKHFKQRGMVLPFQPLSMAFSNINYYVDVPLELKQQGILENRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGVIEGGIYISGYLKRQDSFARISGYCEQTDVHSPCLTVWESLLFSAWLRLSSDVDLNTQKAFVEEIMELVELTPLSGALVGLPGIDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGPKSSELISYFEAIEGVPKIRSGYNPATWMLEVTSSTEESRLGVDFAEIYRSSSLYQYNQELVERLSKPSGNSKELHFPTKYCRSSFEQFLTCLWKQNLSYWRNPQYTAVRFFYTVIISLMLGSICWRFGAKRESQQDLFNAMGSMYSAILFIGITNGTAVQPVVSVERFVSYRERAAGMYSALSFAFAQVVIEFPYVFAQAMIYSSIFYSMGSFVWTLDRFIWYLFFMYFTMLYFTFYGMMTTAVTPNHNVAAIIAAPFYMLWNLFSGFMIPHKRIPLWWRWYYWANPVAWSLYGLLTSQYGGDNHLVKLSNGNLMTITQLYLPLQLNPSISKGDDGIAS 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02839 1187 Gene3D - 1 262 IPR027417 -
Pste6g02839 1187 Pfam Plant PDR ABC transporter associated 496 560 IPR013581 -
Pste6g02839 1187 Pfam ABC-2 type transporter 934 1147 IPR013525 GO:0016020|GO:0140359
Pste6g02839 1187 Pfam ABC-2 type transporter 317 461 IPR013525 GO:0016020|GO:0140359
Pste6g02839 1187 CDD ABCG_PDR_domain2 606 844 IPR034003 -
Pste6g02839 1187 SMART AAA_5 646 838 IPR003593 GO:0016887
Pste6g02839 1187 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 862 IPR003439 GO:0005524
Pste6g02839 1187 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1 463 - -
Pste6g02839 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 237 IPR027417 -
Pste6g02839 1187 FunFam ABC transporter G family member 34 623 855 - -
Pste6g02839 1187 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 12 237 IPR003439 GO:0005524
Pste6g02839 1187 FunFam ABC transporter G family member 34 1 271 - -
Pste6g02839 1187 Gene3D - 622 852 IPR027417 -
Pste6g02839 1187 Pfam ABC transporter 638 789 IPR003439 GO:0005524
Pste6g02839 1187 Pfam ABC-2 type transporter 195 248 IPR043926 GO:0140359
Pste6g02839 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 845 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02839 Pste-Chr6 16118051 16127040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02839 634 821 Calmodulin-binding Proteins AT2G36910 25.521 3.52e-06 49.7