Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02821 atgtcatcaagtggaaccatttggagctatgaggaagaaaaagcatttgagaatgccatagctatgcattggattgaggaagcctcaaaagagcattgggagaaaattgcttcagcagttcccagcaaaagcatggaagaagtgaagcaacattaccatgttctagtggaggatgtaagtgcaatagaggctggtcatgtatcattcccaaactatgcttatgaagaaaccacatcttcaaataaggatttacacggctcttccaaggccacaacttcagagaaaagatcaaattgtaattttggaagtggtttttctgggataggacacgactccagcactcatagtggtaaaggaggcttgtcaaggtcctcagaacaagaaaggagaaaaggaattccctggactgaagaggagcacaggttatttttacttggtctagataagtttggaaaaggagattggagaagcatatcaaggaactttgtgatatctaggactccaactcaagtggcaagccatgcacagaagtacttcataaggttgaattctatgaacagagataggaggaggtcaagtatccatgatataactagtgtgaacaatggagatgtggccagtaatcaagcaccaattacagggcagcatagtattagtagcacaatttcatcaagtacaatgggtggaggacaaacaatgaagcatagagttcagggtcatattccaccaggtttaggcatgtatggaacaccagttgggcatcctgtggcagctcctccggggcatatggcatctgcagttggcactcctgtcatgcttcctcctggatcccatccccatcctcaccctcacccaccttatgttctccctcttgcttacccaatggcacctcctacaatgcatcaataa 909 0.0 MSSSGTIWSYEEEKAFENAIAMHWIEEASKEHWEKIASAVPSKSMEEVKQHYHVLVEDVSAIEAGHVSFPNYAYEETTSSNKDLHGSSKATTSEKRSNCNFGSGFSGIGHDSSTHSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASNQAPITGQHSISSTISSSTMGGGQTMKHRVQGHIPPGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGSHPHPHPHPPYVLPLAYPMAPPTMHQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02821 302 SMART sant 4 58 IPR001005 -
Pste6g02821 302 SMART sant 131 181 IPR001005 -
Pste6g02821 302 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
Pste6g02821 302 CDD SANT 8 56 IPR001005 -
Pste6g02821 302 CDD SANT 134 179 IPR001005 -
Pste6g02821 302 SUPERFAMILY Homeodomain-like 129 184 IPR009057 -
Pste6g02821 302 Gene3D - 133 185 - -
Pste6g02821 302 ProSiteProfiles Myb-like domain profile. 127 179 IPR001005 -
Pste6g02821 302 FunFam Transcription factor SRM1 1 69 - -
Pste6g02821 302 MobiDBLite consensus disorder prediction 101 133 - -
Pste6g02821 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 181 IPR006447 GO:0003677
Pste6g02821 302 ProSiteProfiles SANT domain profile. 135 183 IPR017884 -
Pste6g02821 302 Gene3D - 1 69 - -
Pste6g02821 302 MobiDBLite consensus disorder prediction 101 121 - -
Pste6g02821 302 SUPERFAMILY Homeodomain-like 6 61 IPR009057 -
Pste6g02821 302 ProSiteProfiles SANT domain profile. 3 52 IPR017884 -
Pste6g02821 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 183 IPR017930 -
Pste6g02821 302 FunFam transcription factor MYB1R1 133 184 - -
Pste6g02821 302 Pfam Myb-like DNA-binding domain 134 179 IPR001005 -
Pste6g02821 302 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Pste6g02821 302 PANTHER TRANSCRIPTION FACTOR KUA1 4 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02821 Pste-Chr6 15898460 15899787 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g02821 Myb_DNA-binding 8e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02821 6 15898460 15899787 Pste6g02821 6 15898460 15899787 ECH