Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02797 atggatgcaatacgtgtctctcggtaccccaaaatccggcgcgtcggtttcttcgctcctcccgattcttccgccaccatgattccgtcgccacgtcatccccccctgccggtgtcggagatgatttcttccgccgatggccacgtggcactcgggagctatgatccctcggaaaacctaaacctcgctactggcattgaaaagagggaagagggagagaaagaggttctgcaatcaagttcaaagccgttgaaagcaaaaactaccaaggccgagagacgagccttgcaggaggcacaaagagctgctaaagctgcttctaaagatgagggaagtaaagcagttgctaaaaatggtacagtcgcccccagtaaaggtacaaagcattcttcacaaaataaagatgacccttcctgtgggtctccagtggtcactgataagaaagcagatcgtcctttggagaaggataggaaaaaagatgctcctctgcgtatgcaatttgatgacaaaaaccgaatggaaaatgctagaaaacgtgcagtagtcaatccaactgaagctagaaacagagttgaattatttcagcatttgcctcaatataaatatgggattcaacttcctaatcttgaagcaaaggtcttccagattggttcattgcatccgtctgtatttgaggttggactgcgttacttggcaggagatatatcagggggtaatgctcgctgtattgcaatgctaagagcatttcaagatgcaattagagattactgcacaccacgtgaaaaggtccttgttagggatttaacttcaaacatcagtagttatgtatcttattttgctgaatgtagaccactttctatgagcatgggaaatgcaattaggtttgtaaagagtcgtattgccaatctgcctttaaatcattctgagtttgaggcaaaagcagccctgtgttctgatattgatcggttcattaatgaaaaaataattcttgccgataaggtgattgtccgacacgcttttacaaaggttaaggatggggacgttcttctcacatatggattgtcatgtgttgttgagatgattcttttatatgcgcatgagctgggaaagcagtttcgtgttgtggtggtagattcacggccaaggtttgaaggtcaagctttagttcgtaggctagtggctaagggccttagttgcacatatactcatataaatggtgcttcttatataatgcatgaggtcacacgagttcttctgggagcttctgcagttttgtctaatggaactgtatattcaagggttggaacttcttgtgttgcaatggtagctcatgcatttcgtattcctgtattgatctgttgtgaagcatataaatttcatgaaagggtgctactggattcaatatgctctaacgaactaggtgacccagatgctatttccagggttgctggacgaatggatgtaaattgtctggacaattgggccagtgaagacaatttgaagcttttgaatttgatgtatgatgctactccttcggattatgtctcggttattgtgacagattatggcatgggtttggagggggaggggaggtacagaccttcctag 1608 0.0 MDAIRVSRYPKIRRVGFFAPPDSSATMIPSPRHPPLPVSEMISSADGHVALGSYDPSENLNLATGIEKREEGEKEVLQSSSKPLKAKTTKAERRALQEAQRAAKAASKDEGSKAVAKNGTVAPSKGTKHSSQNKDDPSCGSPVVTDKKADRPLEKDRKKDAPLRMQFDDKNRMENARKRAVVNPTEARNRVELFQHLPQYKYGIQLPNLEAKVFQIGSLHPSVFEVGLRYLAGDISGGNARCIAMLRAFQDAIRDYCTPREKVLVRDLTSNISSYVSYFAECRPLSMSMGNAIRFVKSRIANLPLNHSEFEAKAALCSDIDRFINEKIILADKVIVRHAFTKVKDGDVLLTYGLSCVVEMILLYAHELGKQFRVVVVDSRPRFEGQALVRRLVAKGLSCTYTHINGASYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRIPVLICCEAYKFHERVLLDSICSNELGDPDAISRVAGRMDVNCLDNWASEDNLKLLNLMYDATPSDYVSVIVTDYGMGLEGEGRYRPS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02797 535 Coils Coil 89 109 - -
Pste6g02797 535 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 67 524 - -
Pste6g02797 535 MobiDBLite consensus disorder prediction 50 163 - -
Pste6g02797 535 MobiDBLite consensus disorder prediction 64 111 - -
Pste6g02797 535 SUPERFAMILY NagB/RpiA/CoA transferase-like 232 524 IPR037171 -
Pste6g02797 535 Gene3D - 331 527 IPR042529 -
Pste6g02797 535 MobiDBLite consensus disorder prediction 147 163 - -
Pste6g02797 535 Pfam Initiation factor 2 subunit family 235 524 IPR000649 GO:0044237
Pste6g02797 535 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02797 Pste-Chr6 15632121 15636465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02797 60 524 Eukaryotic Initiation Factors Gene Family AT5G38640 64.092 0.0 612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02797 6 15632121 15636465 Pste6g02797 6 15632121 15636465 ECH