Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02786 atgaagaacaaagagaaggaagtcatctactctgttattcaagggtttgttggaaagtggtggaacggttcttatctttatccagatccttgtggatggactcctatgcagggagtttcctgtgagctatatgatgatggcttctggtatgtaactactgtgaactttagaccagtttttgacaactctctcatatgcagctatgatgctcaattccctcaacaactattcaatctcaagcacctaaaagtcctctcactgtccagttgcttcctttctccaacccaaaatcctgttaaactccctatctcaaactgggacaagttctcacacagtttggaatctttaacatttagatcaaaccctggtcttgttgggaccattccatcagcgattgggacccttaggaagcttcaatctcttgtactgctagagaatgggctgacaggtgaactgcctctaagtattggtaatttggtcaggttgaggcaactagttcttgcaggaaataatttggagggtgaggttcccgcaaactatggaggacttcctcagcttttaatatttgatgcaagcagaaataatatatcaggagttctgccatcaacatttggacttttggattcacttctaaagcttgatttgagtaacaacgagttagagggagagttaccaagtgagctgggaaagctaaaaaatctaaccctactggatatcagtcataacaaacttagaggtgggttgtttagaattaggacgctcaaagaacttgtttccttgaagcatttggttctttccaacaaccctatagggggtgatctcttgggagttaagtgggaaaatttccaaaacatagaagcattggaactttccaacataggtttggaaggaagtgtcccagaatccatagcaaaaatgaaaaggcttagatttctggacctcagcaacaataatctctctggaagtctctctagaaatttggaaaacctgccttgtcttagagctattcgtgtaaatggaaataacttgacagggagacttgacttctcagaagggttttacatgaaaatgggaatgcgttttgcagcttggaacaacgaaaatctatgttatattgtcaaaccaacgcaccaaatgccttatggagtaaaaccttgtgtgcaaaacattactttatctgaaggggtttcaactgttatgataagtgaagggaatttcgaggattcctttgcagtggcctctttgggaagttctggcttttatggacttcgtgagtttgaagttggaggtgaacatggttgggttgtcccaaagtcaaaggagcaggatcaaatgtacaacgaatgggcttcccgaaacagattcaaagttaatgacactcttgtgttcaagtacgagaaagactctgttatggaagtgagtgaagaagagtatgaaaaatgtaaagcctcgcgtcccctgtttttctctaacaatggggagacagtcttcaagtttgagcggccagggttgttctactttatgagtggggttagtggtcactgcaacagagggcagaagatgatcataaaggttttggatttggaagcagcaccctcaccccaatctgcaaatcagactgcacaaaagccacataaaagtggagttattcctcatatgaattctatcacagcatccacattttctgttctgtcaatcttgctccaccaactttatgcttga 1722 0.0 MKNKEKEVIYSVIQGFVGKWWNGSYLYPDPCGWTPMQGVSCELYDDGFWYVTTVNFRPVFDNSLICSYDAQFPQQLFNLKHLKVLSLSSCFLSPTQNPVKLPISNWDKFSHSLESLTFRSNPGLVGTIPSAIGTLRKLQSLVLLENGLTGELPLSIGNLVRLRQLVLAGNNLEGEVPANYGGLPQLLIFDASRNNISGVLPSTFGLLDSLLKLDLSNNELEGELPSELGKLKNLTLLDISHNKLRGGLFRIRTLKELVSLKHLVLSNNPIGGDLLGVKWENFQNIEALELSNIGLEGSVPESIAKMKRLRFLDLSNNNLSGSLSRNLENLPCLRAIRVNGNNLTGRLDFSEGFYMKMGMRFAAWNNENLCYIVKPTHQMPYGVKPCVQNITLSEGVSTVMISEGNFEDSFAVASLGSSGFYGLREFEVGGEHGWVVPKSKEQDQMYNEWASRNRFKVNDTLVFKYEKDSVMEVSEEEYEKCKASRPLFFSNNGETVFKFERPGLFYFMSGVSGHCNRGQKMIIKVLDLEAAPSPQSANQTAQKPHKSGVIPHMNSITASTFSVLSILLHQLYA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02786 573 ProSiteProfiles Leucine-rich repeat profile. 308 331 IPR001611 GO:0005515
Pste6g02786 573 Pfam Leucine rich repeat 192 244 IPR001611 GO:0005515
Pste6g02786 573 Gene3D Ribonuclease Inhibitor 177 274 IPR032675 -
Pste6g02786 573 Gene3D - 424 530 IPR008972 -
Pste6g02786 573 FunFam Piriformospora indica-insensitive protein 2 177 275 - -
Pste6g02786 573 Gene3D Ribonuclease Inhibitor 275 353 IPR032675 -
Pste6g02786 573 SUPERFAMILY L domain-like 12 348 - -
Pste6g02786 573 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 177 272 - -
Pste6g02786 573 FunFam Piriformospora indica-insensitive protein 2 276 378 - -
Pste6g02786 573 SUPERFAMILY Cupredoxins 425 526 IPR008972 -
Pste6g02786 573 FunFam Early nodulin-like protein 1 423 530 - -
Pste6g02786 573 FunFam Piriformospora indica-insensitive protein 2 4 176 - -
Pste6g02786 573 Pfam Leucine Rich Repeat 308 330 IPR001611 GO:0005515
Pste6g02786 573 ProSiteProfiles Phytocyanin domain profile. 424 527 IPR003245 GO:0009055
Pste6g02786 573 SMART LRR_typ_2 159 182 IPR003591 -
Pste6g02786 573 SMART LRR_typ_2 306 330 IPR003591 -
Pste6g02786 573 SMART LRR_typ_2 183 206 IPR003591 -
Pste6g02786 573 SMART LRR_typ_2 207 231 IPR003591 -
Pste6g02786 573 PRINTS Leucine-rich repeat signature 231 244 - -
Pste6g02786 573 PRINTS Leucine-rich repeat signature 210 223 - -
Pste6g02786 573 CDD OsENODL1_like 424 526 IPR041846 -
Pste6g02786 573 Gene3D Ribonuclease Inhibitor 5 176 IPR032675 -
Pste6g02786 573 Pfam Plastocyanin-like domain 442 519 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02786 Pste-Chr6 15531912 15536779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02786 425 526 Phytocyanin Superfamily AT3G18590 70.588 7.53e-49 166