Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02770 atggctggggggagaaggaggaggcaccacttcagcagaatccatgcattcacgtgtgggaaagcttccatgagagatgaacattcgctcataggaggccctggcttctcgaggaaagtatattgcaatgaccctgaacgtgccacggccagtcttcttaattatggtgagaattatgtcagaacaactaagtatacgttggccacgttcctccccaagtccttgtttgagcaattcaggagggttgcaaacttctacttcctcgtttgtgcagttttgtctttcttcccggtgtctccttactcaggtgtcagtaatgttgtccctctcctggttgtggttgctgccacaatggtcaaagagttcattgaggattttaggaggaaacaacaggatatagagatgaataacagaaaagttaaagtgcatcgtggagatggtgcttttgactcttctaaatggagggatttgaaagttggagatgtagtgagggtggaaaaagatgaattttttcctgctgatctcattttacttgcatcaaactatgatgatgcaatttgctatgttgagaccatgaatcttgatggagaaacaaatctgaaactgaaacaagcactggaaggaacttcaaagttgcaagaagactcaaactttcaaaatttcagggctgtcataaaatgtgaagatccaaatgcaaatttgtacacatttgttgggagtatggagctcgaggatcaactgtatcctcttgctcctcaacagctactgcttagggactctaagctgaggaacactgattttgtgtatggtgtggtgatctttactggacatgatacaaaggttatgcagaatgcaacagatcctccatccaagagaagcaagattgagaaaaggatggataagattatctatggtctcttctttgtacttattttgatttctttcattgggtccatattctttgggattgcaacaaataatgacattgaaaatggaagaatgaaaagatggtaccttagaccagatgatactgatatttactatgacccaaatgaaccagtaactgctgcaattttgcatttcttgacagcacttatgctgtatggttacttgattccaatttccttatatgtttccattgaaattgtaaaggttcttcaaagcattttcatcaaccaagatgtgcacatgtattatgaggaaactgacaaaccggcacatgctcgtacatcaaatttgaatgaagaacttggccaagttgataccatactttctgataagacaggaactttgacttgcaattctatggaatttatcaagtgttctattgctggggttgcttatggacgaggagttacagaagttgagagagctctatctaggagacatgagtcacagtccggtcaagagttgagagaaaaaaacattgcaaagattggtgaatcaaagttgtccattaaagggttcaactttatggatgaaaggatcatgaatggaaattggaccaaagaacccaatgccaatgtaatccagaacttcctacggttgctggctgtatgccatactgcaatacctgaagtagatgaagcaactggtaaggtttcatatgaagctgaatcgccagatgaggcagcttttgtcattgcagcaagggaacttggatttgaatttttcgaaagaacacattcagctattttactgcgtgaattggaccccatatctggccagaaaactgaaaggtcctacaaacttttgaatgttttagagtttagtagtgcaagaaagcggatgtctgtaattgtgagagatgaggaggggaaactattactacttagcaaaggagcagacagtgtaatgtttgaacgaattgcaaagaacggaagggattttgaagagaacacaaagcagcatatcggtgaatatgctgattctggtcttaggaccttgatacttgcatatcgtgaacttaatgaggaagaatacaatcaatttaataaagagtttacagcggccaagaacttagtgagtgcagaccaggagcaggtccttgaggagacaatacaaaatattgagaaggatttaattcttcttggtgctactgcagttgaagacaaactacaagatggggttcctgaatgcattgacaagctagcacaggctgggattaagctatgggttttaactggagataaaatggagacagcaattaatattggatttgcttgtagtttactcagacaaggaatgaaacaaattataattagctcagatactccagaaaacaaatcattggagaaaatggaggacaaatctgctgctgaagcgattgcctgtggaatgggggtagggagtagagccgggaaggcaattaagtcaagtgttcttcgtcaactgagggaggcaaaggcattactatctacatctcatgaaaactatgaggccttagccctgatcattgatgggaagtctcttacttatgcactagaagatgatgtaaaggatttgtttctcgaacttgccattggctgtgcatctgttatctgctgtcgttcatctcccaagcagaaagcacttgttacaagactggtgaagatgagaactggtagtacaacactagctattggagatggagcaaatgatgttggaatgctccaagaagcagacattggaattggtatcagtggtgtggaaggaatgcaggctgttatgtcaagtgatattgcaatagcccaatttcggtttctagagcgtttacttcttgtgcatgggcattggtgttacagaaggatctcatcaatgatctgctacttcttttacaagaatattgccttcggcttcactctgttcttctatgagatatatgcctcattctctgggcaagctgcatacaatgattggttcatgtcgctatacaatgtattcttcacttcgcttccggtaattgcactgggagtgtttgatcaagatgtctcttctaaattatgtctcaagtttccattgttatatcaagaaggaattcaaaacatcctatttagctggaaaagaatcatcggttgggcattgaatggagttgtgacttctgccatcgtattcttcttttgcatccgtaccatggaacaccaggcattccgtaaagggggtcaagtcgtgggacttgaagttctaggtgccaccatgtacacctgtgttgtgtgggtggtgaattgccaaatggcattatctatcagttacttcacttacatacaacatatattcatctggggaagcattatattctggtatatattcctcatggcatatggagctatagacccttccttctccaccacagcctataaggtcttcattgaagctcttgcaccagccccatctttctggttcatcactttgctcattcttattgcttgcctccttccatatttcatctatgcttccatccaaatgcgtttcttccctatgtatcatcaaatgattcagtggataagaaaggacgggcaaacaagtgatccagaattctgtaatgtggtaagacagcgatcgataagacacacaacagttggattcacagcacgtttggaagcttccaaacgttttgaagcatccaaaagagttgaagtaccctaccgttttgaggcatccaaacttactgaaggcatgtctgaggacagataa 3672 0.0 MAGGRRRRHHFSRIHAFTCGKASMRDEHSLIGGPGFSRKVYCNDPERATASLLNYGENYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLLVVVAATMVKEFIEDFRRKQQDIEMNNRKVKVHRGDGAFDSSKWRDLKVGDVVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSNFQNFRAVIKCEDPNANLYTFVGSMELEDQLYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYGLFFVLILISFIGSIFFGIATNNDIENGRMKRWYLRPDDTDIYYDPNEPVTAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSRRHESQSGQELREKNIAKIGESKLSIKGFNFMDERIMNGNWTKEPNANVIQNFLRLLAVCHTAIPEVDEATGKVSYEAESPDEAAFVIAARELGFEFFERTHSAILLRELDPISGQKTERSYKLLNVLEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERIAKNGRDFEENTKQHIGEYADSGLRTLILAYRELNEEEYNQFNKEFTAAKNLVSADQEQVLEETIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPENKSLEKMEDKSAAEAIACGMGVGSRAGKAIKSSVLRQLREAKALLSTSHENYEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGIQNILFSWKRIIGWALNGVVTSAIVFFFCIRTMEHQAFRKGGQVVGLEVLGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGSIIFWYIFLMAYGAIDPSFSTTAYKVFIEALAPAPSFWFITLLILIACLLPYFIYASIQMRFFPMYHQMIQWIRKDGQTSDPEFCNVVRQRSIRHTTVGFTARLEASKRFEASKRVEVPYRFEASKLTEGMSEDR 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02770 1223 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1152 IPR023298 -
Pste6g02770 1223 FunFam Phospholipid-transporting ATPase 116 286 - -
Pste6g02770 1223 Pfam Cation transport ATPase (P-type) 529 622 - -
Pste6g02770 1223 CDD P-type_ATPase_APLT_Dnf-like 58 1034 - -
Pste6g02770 1223 NCBIfam HAD-IC family P-type ATPase 840 957 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g02770 1223 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pste6g02770 1223 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Pste6g02770 1223 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1165 - -
Pste6g02770 1223 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 487 699 IPR023299 GO:0000166
Pste6g02770 1223 SUPERFAMILY Calcium ATPase, transduction domain A 137 285 IPR008250 -
Pste6g02770 1223 SFLD Haloacid Dehalogenase 406 925 - -
Pste6g02770 1223 FunFam Phospholipid-transporting ATPase 539 697 - -
Pste6g02770 1223 Gene3D - 693 914 IPR023214 -
Pste6g02770 1223 Gene3D - 527 674 IPR023299 GO:0000166
Pste6g02770 1223 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 1152 IPR032630 -
Pste6g02770 1223 NCBIfam phospholipid-translocating P-type ATPase 55 1159 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pste6g02770 1223 SUPERFAMILY HAD-like 419 929 IPR036412 -
Pste6g02770 1223 Gene3D - 116 286 - -
Pste6g02770 1223 SFLD p-type atpase 406 925 IPR044492 -
Pste6g02770 1223 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pste6g02770 1223 FunFam Phospholipid-transporting ATPase 697 914 - -
Pste6g02770 1223 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02770 Pste-Chr6 15379704 15385874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02770 10 1200 Primary Pumps ATPases AT3G25610 69.849 0.0 1773