Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02755 atggggtgctcattctccggcttgaacgcactctacgactccgtcaacggcggaggcgacgtttggatcaacgagaaccgcttccgcatcgtgcgccagctcggagaaggtggcttcgcctacgtctacctcgtcaaggaggctcccaacgactctgccgtcggtggcctcgccaataagctcaaacactcctctcatatctctgatgatggaacttatgctatgaaaaaggtcctcattcagaacaatgaacagctggagttggttagggaggagatccgtgtttcatcgctgttcaatcaccccaatctgctccctctccttgatcatgccatcatttctgttaaatgtacattctgttgccagcctacccaagaaacatcttggaaccatgaagcatacttgttatttccagttcatttggatggaacattgctagacaatgccaaaataatgaaatccaagaaggaattctattccacctcagatgtgctgcagatatttcgtcaactttgtgcaggactcaagcacatgcacagtttagatcctccttacgcacataatgatgtcaaacctggtaatgttctcataacacatagaaaaggactaccacctcttgccatactgatggattttggcagtgctcgtcctgctaggaagcaaattagctccagatcagctgcactccagttgcaggaatgggcatctgaacattgctctgctcctttccgagctcctgagttgtgggattgcccaagccaagctgatatagatgagaggactgatatttggtcactaggatgcacattatatgcaataatgtatggggtatctccatttgaatatgcacttggagagtctggtggaagcctgcaattggcaattgtaaatgctcaggtcaaatggccagctggacctaagcctccttatccagaagctcttcatcagttcgtgtcatggatgcttcagccccaggctgctatgaggccccggatagatgatatcattatccatgttgataagttgattgcaaagttctccaattga 1047 0.0 MGCSFSGLNALYDSVNGGGDVWINENRFRIVRQLGEGGFAYVYLVKEAPNDSAVGGLANKLKHSSHISDDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKCTFCCQPTQETSWNHEAYLLFPVHLDGTLLDNAKIMKSKKEFYSTSDVLQIFRQLCAGLKHMHSLDPPYAHNDVKPGNVLITHRKGLPPLAILMDFGSARPARKQISSRSAALQLQEWASEHCSAPFRAPELWDCPSQADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGPKPPYPEALHQFVSWMLQPQAAMRPRIDDIIIHVDKLIAKFSN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02755 348 CDD STKc_16 27 344 - -
Pste6g02755 348 ProSiteProfiles Protein kinase domain profile. 28 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02755 348 SMART serkin_6 28 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02755 348 Pfam Protein kinase domain 65 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02755 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Pste6g02755 348 Gene3D Transferase(Phosphotransferase) domain 1 15 347 - -
Pste6g02755 348 SUPERFAMILY Protein kinase-like (PK-like) 20 338 IPR011009 -
Pste6g02755 348 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02755 Pste-Chr6 15203371 15214352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02755 33 338 EF-hand Containing Proteins AT4G04710 24.522 3.46e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Pste6g02755 Pkinase 2.2e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02755 6 15203371 15214352 Pste6g02755 6 15203371 15214352 ECH