Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02749 atggaatgcaatgaattagatgaactccatgtaataccttatgcttccttaacacagtgtcttcactatccttctccttcttcagctcagaaacctaatctgacctcgactaatctcctgaacatggaagctggtgaaggccttactttgacccacatccacatggatccacctcatggtttacatcatattccattttacagttcacaacttcactttcctggcaacagcaacaacccaattcaaattccactccgtaaaccctctcccaaaacatcatcaaacagtaacaacaataactctaatgaagcaaaggctatccttgatgacagaaagaagaggatgttctccaacagagaatctgctcgcaggtcacggatgcgaaagaagcaacaaattgaagtcctgcagtatcatgtggatcatctgcagacattaaataatcaactgtcccaaaagatcatttacttgttagaatgtaaccaacaaatccaccaacagaatgctcagctaaaagagaaagtttcttctcttcaagtagcgctatctgacttgttagttccagctggaagtgctgagcaacctcatcacatccctaatggcttcctagctgagtcttcaactcgaccaattgctagttccagaacatag 651 0.0 MECNELDELHVIPYASLTQCLHYPSPSSAQKPNLTSTNLLNMEAGEGLTLTHIHMDPPHGLHHIPFYSSQLHFPGNSNNPIQIPLRKPSPKTSSNSNNNNSNEAKAILDDRKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNNQLSQKIIYLLECNQQIHQQNAQLKEKVSSLQVALSDLLVPAGSAEQPHHIPNGFLAESSTRPIASSRT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02749 216 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 113 128 IPR004827 GO:0003700|GO:0006355
Pste6g02749 216 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 42 194 IPR044521 -
Pste6g02749 216 Pfam Basic region leucine zipper 110 155 IPR004827 GO:0003700|GO:0006355
Pste6g02749 216 MobiDBLite consensus disorder prediction 77 128 - -
Pste6g02749 216 MobiDBLite consensus disorder prediction 105 128 - -
Pste6g02749 216 FunFam BZIP transcription factor 109 159 - -
Pste6g02749 216 Gene3D - 110 163 - -
Pste6g02749 216 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 108 171 IPR004827 GO:0003700|GO:0006355
Pste6g02749 216 SMART brlzneu 106 170 IPR004827 GO:0003700|GO:0006355
Pste6g02749 216 Coils Coil 161 181 - -
Pste6g02749 216 MobiDBLite consensus disorder prediction 195 216 - -
Pste6g02749 216 SUPERFAMILY Leucine zipper domain 111 161 IPR046347 GO:0003700|GO:0006355
Pste6g02749 216 CDD bZIP_plant_GBF1 111 159 IPR045314 GO:0003700|GO:0006355
Pste6g02749 216 MobiDBLite consensus disorder prediction 77 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02749 Pste-Chr6 15118267 15119224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02749 95 193 bZIP Transcription Factor Family AT5G60830 56.566 1.75e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste6g02749 bZIP_1 4.9e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00380 2 3238724 3239362 Pste6g02749 6 15118267 15119224 PCT