Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02745 atggcagatgtaaccacctatctccgccacccagacgatgaccaaaccctaatcccctttccccattgggatttcgatttcgatttcgatttagatcctgatttctcccctctcacccaccgtgaaaaccaggtcaatttcgtcatggatctattccaccagcgcgtcgagcagtcccaactcaccgatcccctctccaacgacgccgttttcgccctcgatctacccttccccaccgacgaccatttctttctcgcccgccgcttttccctcggatccgactccgacgaccaacactctcagcagatctgcgcccactccgaccaagactacaacgacaacgacgacgtttccaccatccctctctgctgggacgcgcttcaattggaagaccacacagacaattacgaccattttgagtgggaggaagtggtcgatgagagagaggttctcagcattctcgacgacacctccgtttccgtttctgtttccgtcggaatcgaagacgagccagaagaacccgctaattttgagtggcaagttttgttgaacgccaacactttggaaggaaccatttccgaaccctatttcggggacaacgacgatttcggatacactgcggagtacgaaatgatgttcgggcaattcaacgatgacgccttcacggggaagcctccggcttccgcatccgtcgttcggaatcttccctcggtcgttgtgacccatgctgacgtggcaaacgacaacgtggtttgcgctgtttgtaaggaggagtttgtggttggggaacgggtgaagcagttgtcgtgttctcatcgttaccatggggactgcattgtgccttggttggggataaggaacacttgtcccgtttgtcgctttgagtttcccactgatgatgctgattatgagcggaggaaggcccagagatctgttctgtga 942 0.0 MADVTTYLRHPDDDQTLIPFPHWDFDFDFDLDPDFSPLTHRENQVNFVMDLFHQRVEQSQLTDPLSNDAVFALDLPFPTDDHFFLARRFSLGSDSDDQHSQQICAHSDQDYNDNDDVSTIPLCWDALQLEDHTDNYDHFEWEEVVDEREVLSILDDTSVSVSVSVGIEDEPEEPANFEWQVLLNANTLEGTISEPYFGDNDDFGYTAEYEMMFGQFNDDAFTGKPPASASVVRNLPSVVVTHADVANDNVVCAVCKEEFVVGERVKQLSCSHRYHGDCIVPWLGIRNTCPVCRFEFPTDDADYERRKAQRSVL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02745 313 PANTHER SI:CH211-59O9.10 47 298 - -
Pste6g02745 313 SMART ring_2 252 292 IPR001841 -
Pste6g02745 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 299 IPR013083 -
Pste6g02745 313 FunFam E3 ubiquitin-protein ligase RING1-like 214 299 - -
Pste6g02745 313 ProSiteProfiles Zinc finger RING-type profile. 252 293 IPR001841 -
Pste6g02745 313 SUPERFAMILY RING/U-box 234 299 - -
Pste6g02745 313 Pfam Ring finger domain 252 293 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02745 Pste-Chr6 15077519 15079442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02745 7 70 C3H Transcription Factor Family AT5G60820 40.000 6.22e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02745 6 15077519 15079442 Pste6g02745 6 15077519 15079442 ECH