Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02740 atggagcttcctcaagcgcgtccccttggaaccgaagggaggaaaccgacgcatgactttctgtcactctacagtaattcaactgcccaacaagatccaagaccaccttctcaaggtgggacatggggatggtatggggcccaatttggaattggagttgcagatgatttgacgtttcgcatctggtcttgttggggaggaatggcgtcctcgtgaagttacctcaagacccatgatttcttgcagccactagaacggctagaaacaaaagccagtgccaaggaagaagccacagatgaagcatcatcgatggttcaaaagccaccaccttcagttgagcaccttttacctggcggaattggaacttacagtattagccacatttcatatgttaataataataataatcaaagggttccgaagcttgaggcaccccctttcgtgcgtcaagcaacaagtacagataggaacgaggacaactccaactgcagttcatatacttcaagtggtttcactctgtgggaagagtcgtcggggaagagaggaaagccaggaaaggataattatccaggcgagaaaccctctgtaggagagtctgcggcaaagctagggcagtggacatcaacggagctgacgtcacagtcgtattctaacaatcgtcacggcagcttcagctcacgttcttcatctcagccaactggacagaaaaaccagagttttatagaaatgatgaagtctgcaagggaaagtgcccaggacgatgaagggctagaaaatgaagaagaaattttttttctcaagaaagaaccctcaaatacccaaagagaactgacggtgaaagtgaatgggaagagtgctgatcaaaagccaaacacaccaagatcaaaacattctgcaacagaacagcgaagaaggagcaaaattaatgacaggcaagtcattgagtatattcattttttacaagaaaaggtgcacaagtatgaaggttcatttcaagggtggagtaacgaaccagaaaagttgatgccatggcaaagaaataatgacaaaccagaagaaacttttcaacctcatggcaacgataatgggtcagctccatctcccacgcagctgtttgcttcaaagatcgaccagaaaaatatccccatctccccaacaattcctgggagtacccagaatgtagaatccgacttgagcacagcaactacctccaagacaatggatcatcaggctggaataatgaacaaggcttttccaattcctatttcttcacatctaaatttcttcactcgaaaccaaatcggtggtcctgctggagtagtgtctcagctctcaaatagactggcatctaatgctgaaaacaccaaatatcaaccttcagtggaacgtcagactatggctgctaccaatgaaaagctgaaagagaaagagctcactattgaaggtggtgccattagcatatcgagtgtgtactcaaaagggttgttgcatacgcttacacatgcactgcaaaattcaggggtggatttgtcacaggctagcatctcagtgcaaattgaacttggtaaacaagcaaatatcagaccaactgtaccaatgtcagtgtgtagtactaaggatgatgaagttccttctaacaatcaaaagatgatacgctctagattggccagctctgggaagtctgaccaagcagttaagaagctaaagacgtgcaggagttaa 1722 0.0 MELPQARPLGTEGRKPTHDFLSLYSNSTAQQDPRPPSQGGTWGWYGAQFGIGVADDLTFRIWSCWGGMASSXSYLKTHDFLQPLERLETKASAKEEATDEASSMVQKPPPSVEHLLPGGIGTYSISHISYVNNNNNQRVPKLEAPPFVRQATSTDRNEDNSNCSSYTSSGFTLWEESSGKRGKPGKDNYPGEKPSVGESAAKLGQWTSTELTSQSYSNNRHGSFSSRSSSQPTGQKNQSFIEMMKSARESAQDDEGLENEEEIFFLKKEPSNTQRELTVKVNGKSADQKPNTPRSKHSATEQRRRSKINDRQVIEYIHFLQEKVHKYEGSFQGWSNEPEKLMPWQRNNDKPEETFQPHGNDNGSAPSPTQLFASKIDQKNIPISPTIPGSTQNVESDLSTATTSKTMDHQAGIMNKAFPIPISSHLNFFTRNQIGGPAGVVSQLSNRLASNAENTKYQPSVERQTMAATNEKLKEKELTIEGGAISISSVYSKGLLHTLTHALQNSGVDLSQASISVQIELGKQANIRPTVPMSVCSTKDDEVPSNNQKMIRSRLASSGKSDQAVKKLKTCRS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02740 573 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 313 570 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pste6g02740 573 MobiDBLite consensus disorder prediction 535 573 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 290 309 - -
Pste6g02740 573 Coils Coil 84 104 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 1 41 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 136 309 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 332 370 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 201 245 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 20 37 - -
Pste6g02740 573 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 292 345 IPR036638 GO:0046983
Pste6g02740 573 MobiDBLite consensus disorder prediction 271 289 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 150 175 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 539 564 - -
Pste6g02740 573 MobiDBLite consensus disorder prediction 92 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02740 Pste-Chr6 15018934 15030462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02740 1 543 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 41.176 2.39e-92 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02740 6 15018934 15030462 Pste6g02740 6 15018934 15030462 ECH