Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02701 atgtcatccaaaccatgctctttctttgtgcccctatcaccaatagtgagtttggatctctttctggggattctgaccatggtggcggtgttgggctactggctggttccgggtggtcttgcttggggtttgtccaagattagagtgaagggcaagcctgcgattccaggaccatccggtttgccagtggtgggcctggttggggcattcactggacctcttgctcttactcacagggtcctcgctaagatggcggaggcatatgatgcaaagcctttgatggcattctcggtggggttcactccttttatcatctcttcccacccgaatactgccaaagagattttgagcagttccgcttttgcggatcgtcctgtgaaggagtcggcttatgagctcctctttcaccgggcaatggggttcgcaccctatggtgagtactggaggaacctcaggaggatttccgccactcacatgttctctccaaagagaatagccgcctccgcagccttccgggctcaggtggggacccaaatgatgaaagacatcatgagcaagagccaagacggtgaggtggaggtgaggaaggtcctacattttgggtccttgaataacgtgatgaagagcgttttcggcaagagttatgtgtttggtgagggtggtgatgggtgtgagctggaggagttggtgagtgaggggtatgagttgcttggggtgtttaactggactgaccactttcctcttttgggttgcttagatttgcaaggtgtaaggaagagatgccgtagtctggtggagagagtgaacgtttttgtcgggaaaatcatatccgaccacagggtaagggctgctcaaggctctgcaggtgacgctgactttgtagatgtgctgttggatttcgagaaagacaacaagctacaacattctgatatggttgctgtcttgtgggaaatgatatttaggggtactgatacagtggcaatccttttggagtggattcttgcaaggatggttatgcacccggagatccaagagaaggcccagtctgaaattgactcggtggttggggcagggcgcagtgtgagtgatgaagaccttcccaaccttccatacgtgagtgccatagtgaaggaaaccttgaggatgcacccaccgggtcctctcctatcatgggccaggctttccattcatgacacacatattggcaaccactttattccagctggcacaactgccatggttaacatgtgggctatcactcacgaccaacacatttggtctgatccagaacagttcaagccagagcgttttctgaagaacgaggatgtgccaattatggggtctgatcttaggttggcaccttttggctctggaagaagagtgtgtcctggaaaggccatgggtttggccaccctacaactttggcttgctatgttcctacagaacttccaatggaagccttctgattctggtgtcgacttatctgagtgcctcaaactctctatggaaatgaaacgccctctcatcaccaaacctgttacaagaccaccttctgttgccttgcttgtctaa 1572 0.0 MSSKPCSFFVPLSPIVSLDLFLGILTMVAVLGYWLVPGGLAWGLSKIRVKGKPAIPGPSGLPVVGLVGAFTGPLALTHRVLAKMAEAYDAKPLMAFSVGFTPFIISSHPNTAKEILSSSAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPKRIAASAAFRAQVGTQMMKDIMSKSQDGEVEVRKVLHFGSLNNVMKSVFGKSYVFGEGGDGCELEELVSEGYELLGVFNWTDHFPLLGCLDLQGVRKRCRSLVERVNVFVGKIISDHRVRAAQGSAGDADFVDVLLDFEKDNKLQHSDMVAVLWEMIFRGTDTVAILLEWILARMVMHPEIQEKAQSEIDSVVGAGRSVSDEDLPNLPYVSAIVKETLRMHPPGPLLSWARLSIHDTHIGNHFIPAGTTAMVNMWAITHDQHIWSDPEQFKPERFLKNEDVPIMGSDLRLAPFGSGRRVCPGKAMGLATLQLWLAMFLQNFQWKPSDSGVDLSECLKLSMEMKRPLITKPVTRPPSVALLV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02701 523 CDD CYP78 90 508 - -
Pste6g02701 523 Pfam Cytochrome P450 56 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Pste6g02701 523 SUPERFAMILY Cytochrome P450 55 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 FunFam Cytochrome P450 78A5 47 515 - -
Pste6g02701 523 Gene3D Cytochrome P450 44 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PANTHER CYTOCHROME P450 78A7-RELATED 19 515 - -
Pste6g02701 523 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02701 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02701 Pste-Chr6 14510284 14512091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02701 13 515 Cytochrome P450 AT1G74110 64.818 0.0 672