Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02677 atgctagggaaccaaagggaagaaaggaaagtacctttggcctcccttagttttcaaggttctgctttgcattggtgggatgggcatattccttcatattatgagagggatcttttggatagactccaaatacttaggcaacataacctaagtattgaggagtatagacaaaagatggagcttctcatactaagggtcaatatcattgaggaacccaatgccacccttgctaggtttttgtgtggattaagctctgaaattagagataaggtagagcttctttcatactcaaactttgatgagttggtagaactttgtgtaagagttgagaatcaactcaagagaaaaagctttaaaaaagattctccctcttactcaaagagagaccaacttaagggaaactctttcaagggttttcccaaagaggaatccaagcattttcaagatacaaaagcacctcatgtagagagaaaaccccctactactaagcctactaagagtgagaatagctcatcttcctcctctagtgagagtgaggaagaagagggacatacttttgaacaagagtgtgaggaagcttttccttatgaggggacctccttatggttcaaaggcttttggaagccaacctctgagcttgtggctcctgttgtagctctagaagcatcaaatcgttctcccattttgcattcttctgttgagagcactgccacaacccatgcacatgagcaccttcctcaaggggttcaagatattttaaaagaatttgatgacatattccctaatgaggttccgaaaggacttcctcccattagggtgtgggggctgtcttgttgcaaggagggcacccattgcgtatatgataaggagttttatgctctaattagggcccttcaaacttgggagcattaccttgctcccaaggagtttgtcattcatagtgaccatgagtcactaaaatatttgaggggtcaaggtaaattgaacaaaaggcatgcaacgtgggtggaatatcttgaatctttcccttatgtcatcaagtacaagaaaggaaaacaaaatggggtggtgatgctctttccaggccatgccctttattcatccttgagtgcaaaaatcttgggatttgatgacattcgagctatagatgtccatagacattgctctaaatgtatagcttgcttgaaagcaaagtctaaagcaatgcctcatggactatacacacctttatccgctccttcgcaccttgggaggatattagcatggatttcatccttggctcccaaaacccaacgaggtgcgactccatatttgtggtggtggaccgattttcaaaatggcccattttattccctcgccacaaagtggatgatgcgagcaacatcgcaagacttttctttaaagaggttgtccgattgcatgtgcgtgtgcacttgtctttggaaattcccattgttggctgcgaacccacgttatatgtgctccttcaccgccccgataagaacgtctccactgatgatgttccctaaacgtcgcggcgagatcctccacaaagtcaaggctcaagctcccgacgacgacatttctacattgcaacccgacaacgaggacaaagagatatttgtgcctctgctctctcttgttttgttcatcaccgctttcatgggattctttggctacaacctccagtggctcctcgtcatcgatgtccttcgtttgccttatttttttgtctttcttttgtctcttttaggtggttgtggcatctgttggttcaacatagtatgttttgttctctgcattaagaattttccaatggtcatgtag 1827 0.0 MLGNQREERKVPLASLSFQGSALHWWDGHIPSYYERDLLDRLQILRQHNLSIEEYRQKMELLILRVNIIEEPNATLARFLCGLSSEIRDKVELLSYSNFDELVELCVRVENQLKRKSFKKDSPSYSKRDQLKGNSFKGFPKEESKHFQDTKAPHVERKPPTTKPTKSENSSSSSSSESEEEEGHTFEQECEEAFPYEGTSLWFKGFWKPTSELVAPVVALEASNRSPILHSSVESTATTHAHEHLPQGVQDILKEFDDIFPNEVPKGLPPIRVWGLSCCKEGTHCVYDKEFYALIRALQTWEHYLAPKEFVIHSDHESLKYLRGQGKLNKRHATWVEYLESFPYVIKYKKGKQNGVVMLFPGHALYSSLSAKILGFDDIRAIDVHRHCSKCIACLKAKSKAMPHGLYTPLSAPSHLGRILAWISSLAPKTQRGATPYLWWWTDFQNGPFYSLATKWMMRATSQDFSLKRLSDCMCVCTCLWKFPLLAANPRYMCSFTAPIRTSPLMMFPKRRGEILHKVKAQAPDDDISTLQPDNEDKEIFVPLLSLVLFITAFMGFFGYNLQWLLVIDVLRLPYFFVFLLSLLGGCGICWFNIVCFVLCIKNFPMVM 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02677 608 MobiDBLite consensus disorder prediction 119 189 - -
Pste6g02677 608 Pfam Nodulin-like 545 606 IPR010658 -
Pste6g02677 608 Pfam RNase H-like domain found in reverse transcriptase 285 342 IPR041373 -
Pste6g02677 608 Coils Coil 45 65 - -
Pste6g02677 608 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 30 188 - -
Pste6g02677 608 CDD RNase_HI_RT_Ty3 285 357 - -
Pste6g02677 608 MobiDBLite consensus disorder prediction 134 163 - -
Pste6g02677 608 SUPERFAMILY DNA/RNA polymerases 283 349 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02677 Pste-Chr6 14172187 14178431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02677 548 605 Nodulin-like Gene Family AT4G19450 63.793 5.73e-18 84.7