Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02664 atggcgtcgtgttcagcaaagcgatgccactacgaagtgttggggctcccccgcgagtgcggcggcgaagagatccgttcaagctatcgtcgcttagcgcttcagcggcaccctgacaagctggtgaaatcgggtctctcccaggaggaagccaccgcgcagttccaggaactccaacacgcctatgaagtgctctccgatccgaaggaacgtgcctggtacgattcccaccgctctcagattctcttctccgatcccaactctgtctccaactccctcgtccctgacctcttctccttcttctccaacaccgtctattccggttactcccattccggaaagggattctataaagtctactctgacgttttcgataaaatccacgccaatgagattaatttcgcgcgcaaattgggccttggtgttgacgcggttaagcaggcccctcttatgggcaatttggatagtccttacgcccaggttactgccttttatagttattggttagggttttgtactgttatggatttttgttgggtggatgagtatgatgttatggcggggccgaaccggaagtcgcggcggcttatggaggaggagaataataaggttaggaggaaggcgaggagggagtataacgacactgtgaggaggttgggggattttgtgaagaagagggataagagggtgattgatatgaagctgaagaggagtgccgaggaggagaagaagaaggaggaggagagggagaggaagaggaggttggagaaggagaagaaggagcgcgccatggcttatgaggagcctgattgggctaagctccaagaccatgaggtgcttgaggaggagggcgacgacgagtgtgttgaagagaagaagaatgagttttattgcgtgctgtgcgggaagaagtttaagagtgagaagcagtggaagaatcatgagcagtccaaaaagcataaggagagggttgctgagttcagggattccattggtgatgaagaggatttggatgaagagaacgagacattggaaagtgaggaagatcaggttgaggtgaatgatgagactgatcctggggttcgtgatttggaggagaggattagggattctcttaatgttgatgcgggggaaactagaaatggggttgaactgaatgatgatgaagatgacgataaagatcagtttttttatgcctcgcatgtgaaggagctcgaagagaccaacgagtcggctaatctagatgatgatgatggtggcaatgaagaagatgatgaaaatggagttcttgaagcaatggtggccgggcacaagaacagcaaaccacgtacttcagtaaacaaacccaaggcttcagtagccgcgtcgcaaattgaaaatgagaatgatgaggttgaccctatggaatataacaacagaaagggttcaagaaagaaacgtggagccaagaaagagaaggggaggaaaatttgggaagagtctcgtgaggcttccgccagtgttgattatgaaaatataaacagtaatggaaattataattctcgtgcagaagagccttgctcccaacattttgtaaaaaatgaggataatgttaaagagaatgagcatgttggtagagataagaagatttcaaatgtacaagctgataaaaaaggagctggcaaggacacaaaaaccaaagcaaaagtttcatccaaaggaagaaaagcaaaggtaacatcaaagcatgttggcaatatttgtgaggcgtgtggagaggagtttgagtcaaggtcgataaaggaggaagctaccgataatcaagatcccccgagtactggtctagttccatattggcctgctcaaattaatggtccattctttaattcttaa 1872 0.0 MASCSAKRCHYEVLGLPRECGGEEIRSSYRRLALQRHPDKLVKSGLSQEEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSVSNSLVPDLFSFFSNTVYSGYSHSGKGFYKVYSDVFDKIHANEINFARKLGLGVDAVKQAPLMGNLDSPYAQVTAFYSYWLGFCTVMDFCWVDEYDVMAGPNRKSRRLMEEENNKVRRKARREYNDTVRRLGDFVKKRDKRVIDMKLKRSAEEEKKKEEERERKRRLEKEKKERAMAYEEPDWAKLQDHEVLEEEGDDECVEEKKNEFYCVLCGKKFKSEKQWKNHEQSKKHKERVAEFRDSIGDEEDLDEENETLESEEDQVEVNDETDPGVRDLEERIRDSLNVDAGETRNGVELNDDEDDDKDQFFYASHVKELEETNESANLDDDDGGNEEDDENGVLEAMVAGHKNSKPRTSVNKPKASVAASQIENENDEVDPMEYNNRKGSRKKRGAKKEKGRKIWEESREASASVDYENINSNGNYNSRAEEPCSQHFVKNEDNVKENEHVGRDKKISNVQADKKGAGKDTKTKAKVSSKGRKAKVTSKHVGNICEACGEEFESRSIKEEATDNQDPPSTGLVPYWPAQINGPFFNS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02664 623 MobiDBLite consensus disorder prediction 308 330 - -
Pste6g02664 623 ProSiteProfiles dnaJ domain profile. 9 78 IPR001623 -
Pste6g02664 623 MobiDBLite consensus disorder prediction 355 374 - -
Pste6g02664 623 CDD DnaJ 9 67 IPR001623 -
Pste6g02664 623 ProSitePatterns Zinc finger C2H2 type domain signature. 298 320 IPR013087 -
Pste6g02664 623 MobiDBLite consensus disorder prediction 590 613 - -
Pste6g02664 623 MobiDBLite consensus disorder prediction 394 409 - -
Pste6g02664 623 MobiDBLite consensus disorder prediction 521 563 - -
Pste6g02664 623 MobiDBLite consensus disorder prediction 331 354 - -
Pste6g02664 623 SUPERFAMILY beta-beta-alpha zinc fingers 288 335 IPR036236 -
Pste6g02664 623 MobiDBLite consensus disorder prediction 440 459 - -
Pste6g02664 623 ProSiteProfiles Zinc finger C2H2 type domain profile. 296 325 IPR013087 -
Pste6g02664 623 Pfam DnaJ domain 10 75 IPR001623 -
Pste6g02664 623 MobiDBLite consensus disorder prediction 238 261 - -
Pste6g02664 623 Coils Coil 334 357 - -
Pste6g02664 623 Coils Coil 230 265 - -
Pste6g02664 623 SMART ZnF_U1_5 293 327 IPR003604 GO:0003676|GO:0008270
Pste6g02664 623 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 1 592 IPR044648 -
Pste6g02664 623 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
Pste6g02664 623 SMART dnaj_3 8 70 IPR001623 -
Pste6g02664 623 MobiDBLite consensus disorder prediction 308 575 - -
Pste6g02664 623 MobiDBLite consensus disorder prediction 500 520 - -
Pste6g02664 623 SUPERFAMILY Chaperone J-domain 5 89 IPR036869 -
Pste6g02664 623 Gene3D Classic Zinc Finger 286 346 - -
Pste6g02664 623 Gene3D DnaJ domain 2 88 IPR036869 -
Pste6g02664 623 PRINTS DnaJ domain signature 11 29 IPR001623 -
Pste6g02664 623 PRINTS DnaJ domain signature 50 70 IPR001623 -
Pste6g02664 623 PRINTS DnaJ domain signature 29 44 IPR001623 -
Pste6g02664 623 MobiDBLite consensus disorder prediction 410 429 - -
Pste6g02664 623 Pfam Zinc-finger double-stranded RNA-binding 296 321 IPR022755 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02664 2 592 C2H2 Transcription Factor Family AT1G74250 49.921 2.94e-168 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste6g02664 DnaJ 2.1e-20 CL0392