Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02647 atggaagacgatcaaattcaagaattgaaacacgcgtgcaagttctgcgggaagagcttcccttgtggcagatctttggggggtcacatgaggtctcatatcaccaacttatcatctgatggaaaagaaaagcttccaacgaggaagctttcatcgtctctcaacaatggtggagacaaagattccgaagctgctgaagcaactaacgctgcgtatggtctcagagagaaccccaagaagacttggagaatctcagattattcaggcgaggacgctttggtgtttgacaagttctgcaaagagtgtggcaaagggttcccctcttggaaggccttgtttggccacatgaaatgccactccgagaaagaaagggtttccaacagcttggaagatcaagattcttggactaatgctaaggtggttatggatagccagtctgataacgaagctactgctccaaataggagaagaaggtccaagagaaggacaaggtacacggttgcttctgtaacagctacttcttccgttgtttcttttgccaatccttcatcttctctttctgaggttgagcaagagcaagaagaggttgctatgagcttgatgatgctcagtagggatgtgagtccttggagtggtcctcattctgttgccgagtcttctgacaacagctctgcttatttcgaagctccatcttcagttcgaactaatttggttaccaaatttgatggcaacaagaacttcactcccaagatagcaaaagtgatcaagcaaagtgataacaagtgggaggttggcaattccggaaacttcaactcaaaccgagggaagagtttacaactttttactactactactactgcttctacagagattcctgaaaatgaatttagagtgaacaaaagtggagtttccaataaagggtatgaaaaagccaacaagtctgagcttgagtatgtgtctgcattggaggattctaaaggtgaaaatgggaggagcagagtcaatggaacagaatcagttttatcaaagtcggctactgctggcaacaagtacagttcaatcaaaacaaataagaactgggtggacaaggctttggaagctgaatctagcaagaactctagtaagagaggaaagtttgagtgtaccacctgcaacaaaatcttccactcataccaagctcttggaggccacagagctagccataagaagatcaaaggctgctttgcttcaagaaatgacagcagtgaaaacaacagcattgaaactgatctctctcctgacccaataactaccgaaaataagctcctgaagaacagagacagtgagtatctggttaaacatcaacatggtgctggttttcaaaatgaagtggaaacaattaatgagtccaagaagagcaaggggcatgagtgcccaatttgccttaaggtgtttccatcaggccaagccttgggtggccataagagatctcatatggctggtgggtcagaaagtagaagctttcagacaatagtgcttcaggaacctgtggcgcaaattaaggacttccttgatcttaatcttccagctgccactgaggaagaaagcaatagccatgctgactcgaacagaacctggtgggtagtagaagacaaccacaaacaggaggcactggttggcctgatctcatag 1671 0.0 MEDDQIQELKHACKFCGKSFPCGRSLGGHMRSHITNLSSDGKEKLPTRKLSSSLNNGGDKDSEAAEATNAAYGLRENPKKTWRISDYSGEDALVFDKFCKECGKGFPSWKALFGHMKCHSEKERVSNSLEDQDSWTNAKVVMDSQSDNEATAPNRRRRSKRRTRYTVASVTATSSVVSFANPSSSLSEVEQEQEEVAMSLMMLSRDVSPWSGPHSVAESSDNSSAYFEAPSSVRTNLVTKFDGNKNFTPKIAKVIKQSDNKWEVGNSGNFNSNRGKSLQLFTTTTTASTEIPENEFRVNKSGVSNKGYEKANKSELEYVSALEDSKGENGRSRVNGTESVLSKSATAGNKYSSIKTNKNWVDKALEAESSKNSSKRGKFECTTCNKIFHSYQALGGHRASHKKIKGCFASRNDSSENNSIETDLSPDPITTENKLLKNRDSEYLVKHQHGAGFQNEVETINESKKSKGHECPICLKVFPSGQALGGHKRSHMAGGSESRSFQTIVLQEPVAQIKDFLDLNLPAATEEESNSHADSNRTWWVVEDNHKQEALVGLIS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02647 556 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Pste6g02647 556 Gene3D Classic Zinc Finger 376 491 - -
Pste6g02647 556 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 539 - -
Pste6g02647 556 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Pste6g02647 556 ProSitePatterns Zinc finger C2H2 type domain signature. 471 491 IPR013087 -
Pste6g02647 556 ProSitePatterns Zinc finger C2H2 type domain signature. 381 401 IPR013087 -
Pste6g02647 556 SUPERFAMILY beta-beta-alpha zinc fingers 98 401 IPR036236 -
Pste6g02647 556 Pfam C2H2-type zinc finger 11 33 - -
Pste6g02647 556 Pfam C2H2-type zinc finger 99 121 - -
Pste6g02647 556 Pfam C2H2-type zinc finger 379 403 - -
Pste6g02647 556 Pfam C2H2-type zinc finger 469 493 - -
Pste6g02647 556 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Pste6g02647 556 Gene3D Classic Zinc Finger 1 124 - -
Pste6g02647 556 MobiDBLite consensus disorder prediction 33 71 - -
Pste6g02647 556 SUPERFAMILY beta-beta-alpha zinc fingers 8 35 IPR036236 -
Pste6g02647 556 SMART c2h2final6 11 33 IPR013087 -
Pste6g02647 556 SMART c2h2final6 469 491 IPR013087 -
Pste6g02647 556 SMART c2h2final6 379 401 IPR013087 -
Pste6g02647 556 SMART c2h2final6 97 119 IPR013087 -
Pste6g02647 556 MobiDBLite consensus disorder prediction 141 163 - -
Pste6g02647 556 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 33 IPR013087 -
Pste6g02647 556 ProSiteProfiles Zinc finger C2H2 type domain profile. 379 406 IPR013087 -
Pste6g02647 556 ProSiteProfiles Zinc finger C2H2 type domain profile. 469 491 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02647 Pste-Chr6 13882454 13884964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02647 402 527 C2H2 Transcription Factor Family AT1G26610 44.882 8.83e-20 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste6g02647 zf-C2H2_6 1.2e-12 CL0361