Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02623 atgcgggccaatcttcttcgagccggtcagcaagggcggctcgaccggtctattggctcgtccataacctgcacctccaagtccaacacgcatcccagtggtttcaaatttctcatgttcttgagtaaggttgttgtaggggaatccttggacacagacaaagaggttctgctgaagctgaaatcgtacctggacaagaaaattcttgcagacacaggaaggtacatatattggaacaccagcagctccaatccttgtgaatggaaaggaataagatgcagtgatacgaggagagtggttggcatagacctttcttatagtgacatcaccggtgacatattcaagaacttctcccagctcactgaactcacgcaccttgatctctctaagaacacactttctggccagattcctgaggacttgaggctctgccacaagcttgtgcatctcaatctatcacataatattcttgatggggtgctgaacttgacgggattgacaagcttgcacacactggacctttcaaataacagattttatgggaatattgagatgaattttcctgccatatgcggcaatttagtcactttgaatgtctcaggtaataataactttactggtaggattgaaaactgctttgatcaatgtctcaagttgcagtacttggatttgagcaccaacagtctgagtggaagcatgtggatgaaatttgcgaggctcaaaaagttttctattgcggagaatcatctaactggaactattcctttggaggcttttcctttgaattgtagccttgaagaactagacctttcacaaaatggatttgttggtgaggcacctaagggggttgcaaactgcaagaatttaaccagtctgaatctttctagtaacaaatttacagggggtattcctgttgaaatagggtccatttcaggcctcagagcattgtacttggggaacaacagcttttcaagagagattcctgaggcccttctgaacttgaccaacttggccttcttggatttgagtagaaaccaatttggtgaggacatacaagagatatttgggaaatttaagcaattgagctttcttctgttgcactcaaataattacaccggaggattgagatcctcaggagttttctcattgccaaacatttggaggttagacctaagctacaataacttttctggtccattacctattgagatctctaaaatgtcaagtctgaagtttctaatgttatcctacaaccaattcaatggatccattccacccgaatttggaaatatgactcaactgcaagcacttgaccttgccttcaataatctgagtgggcctataccccaaagcattggaaacttgagctctctcttatggttgatgcttgcaaacaattctttaaccggagaaatccctcgagagttgggaaactgttcaagcttgttatggctaaacctagccaacaataagctctctggaaagttgccttctgaactgtccaaaattggaaggaatgccacgaccacgtttgaatcaaataggagaaactatcgtatgattgcaggctctggtgaatgtttagccatgaggagatggatacctgcagattaccctccatttagctttgtgtatagcctcttaacaaggaaaaattgtagagaactttgggacaaattgctcaaaggatatggtgttttcccgttttgcactcctggttcagtggtgaaatcccttcagatatccgggtatgttcaactaagttcaaaccagctcagtggtgaaatcccttcagagcttgggacaatggtgaacttcagcgtgatgcacttggggttcaacaacttctctgggaagctccctccagagatgggaagtattcccattgtggtactaaacatcacaagaaaccagttttcaggtgaaattccccaagaaattggcaacatgaaatgtttgatgaatctcgacttgtcatacaacaatttctcagggatttttcccacaagtctgagcaaattgacagagcttaacaagttcaacatctcttacaacccctttatatctggtgaggtcccatcaaacggacaatttgctaccttcgaggcaaattcatatttaggcaatcccctcttgatccttcccaagttttttggtaatgttaccaatgaaagaaacaccacctctaccaaagaacataaaaagtccacaggactgtctgtgtttttagtgtttctggttataacgctcgttttcgcagtagttgggcttcttactatcctagtctgtgtatcgatgaaaaacccttcagaggaaccaagatacctcttgagggatacaaaacattggcatgattccagcagctccggatcctcatcatggatgtctgacacagttaaggttatccgtttgaacaagacagctttcactcattcggacattctgaaagcaaccagcagcttctcagaggacagaattatcggaaaaggtgggtttggaatagtgtacaagggagagttttcagatggcagacaagtggcggtgaagaagctccaaagtgaaggccttgagggtgaaaaggaattcaaggctgaaatggaggttctgagtggtcatggctttggttggcctcatccaaacctggtcacactctacggttggtgcctaaatggttcagagaagatactgatttatgagtacatagagggtggaagcttggaggatctagtgactgatagaacacgtttaacatggaggaggaggctagaagtggcaattgatgtggcacgtgcactagtgtatctacaccacgagtgctatcctgctgttgtgcacagagatgtgaaggctagcaatgtgttactagacaaagatgggaaggccaaagttactgattttgggcttgctagagtggttgatgttggggatagtcatgtgagtactatggtggctgggacagtgggctatgttgcacctgaatatggccacacgtggcaggctactacaaaaggggatgtgtacagttttggggtgttggttatggagctggcaacagcaagaagagcagtggatggaggggaagagtgtttggtggaatgggctaggcgtgttatgggttatggaagacatcatggtcatggattgagacgttctgtgccagtgttgctgatgggttctgggcttgttggtggggctgaggagatgggtgagctgctaaggattggggtcatgtgctcagctgatgcaccgcaggctaggccgaacatgaaggaagttcttgctatgctgattaggatatccaatctcaagggggactcaggttatggacaccttgtttatagagtaagttatgagctctgttttgttttctttgacatgattttaactaattggtgcaatgagcgtggaacatttcactttgtcatgacttcaacaaagtacgagggtgctgacaagatggatgtttctttaacaaaaaaagaaaaattagatattatcgagaaagctcatagtgtgataatcttgagtcttggagacaaggttctgagacaagtctctaaggaaaagactacgacagggatttgggtcaagcttaaagggctctacatgaaaaaatctctagtaaactgtctttatctcaagcaagctctatcaaaccttgttgcattatgtgccttgcctaagacacatgcccaccttaaagaaactcttctaaataggagagaatctttgacctttgaagatgtgcaagctgccttaacttcaagagaattaaatgaagggaaggagcttaagtcctctactattggtgagagactgtatatgaaatggaaatcttcaaagaaagacaataagattgataagaagaaagggaagccacaacaaaaggtttctggtagaaatggtccaaatataagatgttaccattgcaagaaagaaggtcatacaaatgcatttgtgacctctagcaacaattctgataaagaatggatcatggatttgggttgcacttggcatatgactccaaaaaaatcattgtttgaggagttgtgtgaacaagatgctagttcagttctccttggtaatagcaagccttgcaaaattgcaggaattggatctattaggttcaagttcaatgatgaaactgagaggcttctcattggattaaatggtattataaggcacaagactgtagtaggaactcctcaacaaaatgttctagctaaaagattcccttcaactgcttttgaaatgaaaacacctgaagaagtgtggtcaggtcatcctcctaacctggaaaggcttaaggtgtttagttgtgttgcttatgcccgtattaggcacatgaaatgtatcattagtcgtgatgttgtgttcaatgagaatgaaatggcttttaaaccaatcattgttgttcaaaaaccaattgaaactaacaagtctgatattgataggtcaattttgaggtggagcatgaggaaggtcttggaagatgaaccaaagacttataaagttgctttaacttttgaagataaagaaaaatgggtgcatgctatgaatgaggagatgaaatctctttatgacaataatacttggaagttgatcaaaaggcctattggtccaagattggtcagctgtaaatggatttttaaaagaaaagaagtgtttgaagtcaaaaggaaagaagattatgtgtgcaagctgaataggtctctttatggcctaaagcaatctcctagacaatggaataaaagatttgatgaatttgtggcacatatttccaaagaacaattcaagctaaatgtaaatcaagctccaaagactgaagatgacaagatttatatagacaacattccttatgcaattgttattggaactttgatatacgtcaaaggatcacttggtagagttttggtttatggtggagctagagaatcaagaaagcttattgccataaaaagatttgtggattttgattatacaggttgtctagacactagaaagccacttacaaaatatattttcactgcttttgggactggcattagttggaaagttagtttacaaaaggttgtagctttatcaactactaaggcaaaatatattgccttgactaaagctataaaggaagctttatggcttgaagggattgctaaagagttgaaactacaagttcaagtcattactgtcttttgtgatagccaaagtgtcattcatctatcgaagaaccaagcttatcatgagagaatcaagtatattgacattaagctacattttgtcagaaaagtgattgggaaatga 5301 0.0 MRANLLRAGQQGRLDRSIGSSITCTSKSNTHPSGFKFLMFLSKVVVGESLDTDKEVLLKLKSYLDKKILADTGRYIYWNTSSSNPCEWKGIRCSDTRRVVGIDLSYSDITGDIFKNFSQLTELTHLDLSKNTLSGQIPEDLRLCHKLVHLNLSHNILDGVLNLTGLTSLHTLDLSNNRFYGNIEMNFPAICGNLVTLNVSGNNNFTGRIENCFDQCLKLQYLDLSTNSLSGSMWMKFARLKKFSIAENHLTGTIPLEAFPLNCSLEELDLSQNGFVGEAPKGVANCKNLTSLNLSSNKFTGGIPVEIGSISGLRALYLGNNSFSREIPEALLNLTNLAFLDLSRNQFGEDIQEIFGKFKQLSFLLLHSNNYTGGLRSSGVFSLPNIWRLDLSYNNFSGPLPIEISKMSSLKFLMLSYNQFNGSIPPEFGNMTQLQALDLAFNNLSGPIPQSIGNLSSLLWLMLANNSLTGEIPRELGNCSSLLWLNLANNKLSGKLPSELSKIGRNATTTFESNRRNYRMIAGSGECLAMRRWIPADYPPFSFVYSLLTRKNCRELWDKLLKGYGVFPFCTPGSVVKSLQISGYVQLSSNQLSGEIPSELGTMVNFSVMHLGFNNFSGKLPPEMGSIPIVVLNITRNQFSGEIPQEIGNMKCLMNLDLSYNNFSGIFPTSLSKLTELNKFNISYNPFISGEVPSNGQFATFEANSYLGNPLLILPKFFGNVTNERNTTSTKEHKKSTGLSVFLVFLVITLVFAVVGLLTILVCVSMKNPSEEPRYLLRDTKHWHDSSSSGSSSWMSDTVKVIRLNKTAFTHSDILKATSSFSEDRIIGKGGFGIVYKGEFSDGRQVAVKKLQSEGLEGEKEFKAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILIYEYIEGGSLEDLVTDRTRLTWRRRLEVAIDVARALVYLHHECYPAVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLVMELATARRAVDGGEECLVEWARRVMGYGRHHGHGLRRSVPVLLMGSGLVGGAEEMGELLRIGVMCSADAPQARPNMKEVLAMLIRISNLKGDSGYGHLVYRVSYELCFVFFDMILTNWCNERGTFHFVMTSTKYEGADKMDVSLTKKEKLDIIEKAHSVIILSLGDKVLRQVSKEKTTTGIWVKLKGLYMKKSLVNCLYLKQALSNLVALCALPKTHAHLKETLLNRRESLTFEDVQAALTSRELNEGKELKSSTIGERLYMKWKSSKKDNKIDKKKGKPQQKVSGRNGPNIRCYHCKKEGHTNAFVTSSNNSDKEWIMDLGCTWHMTPKKSLFEELCEQDASSVLLGNSKPCKIAGIGSIRFKFNDETERLLIGLNGIIRHKTVVGTPQQNVLAKRFPSTAFEMKTPEEVWSGHPPNLERLKVFSCVAYARIRHMKCIISRDVVFNENEMAFKPIIVVQKPIETNKSDIDRSILRWSMRKVLEDEPKTYKVALTFEDKEKWVHAMNEEMKSLYDNNTWKLIKRPIGPRLVSCKWIFKRKEVFEVKRKEDYVCKLNRSLYGLKQSPRQWNKRFDEFVAHISKEQFKLNVNQAPKTEDDKIYIDNIPYAIVIGTLIYVKGSLGRVLVYGGARESRKLIAIKRFVDFDYTGCLDTRKPLTKYIFTAFGTGISWKVSLQKVVALSTTKAKYIALTKAIKEALWLEGIAKELKLQVQVITVFCDSQSVIHLSKNQAYHERIKYIDIKLHFVRKVIGK 1766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02623 1766 Gene3D Transferase(Phosphotransferase) domain 1 901 1107 - -
Pste6g02623 1766 Gene3D Ribonuclease Inhibitor 571 729 IPR032675 -
Pste6g02623 1766 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Pste6g02623 1766 Pfam Leucine rich repeat 102 155 IPR001611 GO:0005515
Pste6g02623 1766 Pfam Leucine rich repeat 433 492 IPR001611 GO:0005515
Pste6g02623 1766 CDD RNase_HI_RT_Ty1 1655 1764 - -
Pste6g02623 1766 Gene3D Phosphorylase Kinase; domain 1 784 900 - -
Pste6g02623 1766 FunFam Suppressor of npr1-1 constitutive 4 790 900 - -
Pste6g02623 1766 MobiDBLite consensus disorder prediction 1280 1300 - -
Pste6g02623 1766 Pfam Protein kinase domain 822 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02623 1766 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 255 351 - -
Pste6g02623 1766 Pfam Leucine rich repeat N-terminal domain 51 94 IPR013210 -
Pste6g02623 1766 ProSiteProfiles Protein kinase domain profile. 821 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02623 1766 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 901 1103 - -
Pste6g02623 1766 SMART serkin_6 821 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02623 1766 CDD STKc_IRAK 827 1099 - -
Pste6g02623 1766 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 262 1096 - -
Pste6g02623 1766 Gene3D Ribonuclease Inhibitor 50 332 IPR032675 -
Pste6g02623 1766 SUPERFAMILY L domain-like 201 497 - -
Pste6g02623 1766 SMART LRR_typ_2 120 144 IPR003591 -
Pste6g02623 1766 SMART LRR_typ_2 455 479 IPR003591 -
Pste6g02623 1766 SMART LRR_typ_2 310 333 IPR003591 -
Pste6g02623 1766 SMART LRR_typ_2 166 193 IPR003591 -
Pste6g02623 1766 SMART LRR_typ_2 334 357 IPR003591 -
Pste6g02623 1766 SMART LRR_typ_2 431 454 IPR003591 -
Pste6g02623 1766 SMART LRR_typ_2 650 673 IPR003591 -
Pste6g02623 1766 SMART LRR_typ_2 407 430 IPR003591 -
Pste6g02623 1766 ProSiteProfiles Leucine-rich repeat profile. 146 167 IPR001611 GO:0005515
Pste6g02623 1766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 943 955 IPR008271 GO:0004672|GO:0006468
Pste6g02623 1766 SUPERFAMILY L domain-like 584 702 - -
Pste6g02623 1766 SUPERFAMILY L domain-like 78 255 - -
Pste6g02623 1766 SUPERFAMILY Protein kinase-like (PK-like) 803 1097 IPR011009 -
Pste6g02623 1766 MobiDBLite consensus disorder prediction 1280 1294 - -
Pste6g02623 1766 Gene3D Ribonuclease Inhibitor 340 547 IPR032675 -
Pste6g02623 1766 ProSitePatterns Protein kinases ATP-binding region signature. 827 850 IPR017441 GO:0005524
Pste6g02623 1766 FunFam Putative LRR receptor-like serine/threonine-protein kinase 358 519 - -
Pste6g02623 1766 Pfam gag-polypeptide of LTR copia-type 1167 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02623 Pste-Chr6 13648730 13658685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02623 81 1096 Receptor kinase-like Gene Family AT1G55610 32.356 2.04e-149 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pste6g02623 Pkinase 3.1e-42 CL0016