Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02615 atggggtgtgtggttgcgaagcaggcggtgtcagtgacgcctgcggttgagcactcggttgagtcggacaagaacaggaagaagaagaccgagtcagtgggagcggctgagtccggcagagcgagttccaatggtggcagtgagtctctcagcttcagattggggaacttaagtaagtacgtggaggcagagcaggctgccgcgggttggccggcgtggctctgcaccgtcgcgtctgaggccattcacggttgggtgcctctccgagctgacgcatttgagaaacttgataagattgggcagggtacatatagtagtgttttccgagcaaaggagactgagactgggaagatagtggctttgaagaaggtgagattcgacaattttgagccagagagtgtgaggtttatggcacgagaaataatgattcttaggaggcttgatcatccaaacatcattaaactggagggcttgattacttctagattgtcttgtagcatataccttgtgtttgagtatatggagcacgacatcacggggctcttgtctagaccagaaatcaagtttagtgaatcacagatcaaatgctacatgaaacagttgttatctggtcttgaacattgtcactcgcggggtgtgatgcaccgggacatcaaaggagcaaatcttttggtgaataatgaagggatattaaaggtggcagattttggattggcaaatttctccaattctgggaagaagcagcccctcactagtcgtgtggtcaccttatggtaccgtcctccagaacttttgctcggttcaacagactatggtccatccgtggatctctggagtgttggctgtgtatttgcagaattactaattgggaagcctatacttcaggggagaaccgaggttgagcaattgcacaaaattttcaagctttgtggctccccacccgaagaatactggaaaaagaccaaacttcctcatgcaacattgttcaagccacagcaaccatatgatagttgcctccgagagacatttaaagattttcatgcatccagtgtaaatcttctacaaactcttctttctgttgaaccaagcaaacgtggaactgcttcctctgctctctcattggagtatttcaacacaaaaccttatgcatgtgacccatcaggcttaccgatatacccacctagcaaggagattgatgcgaaacatgaggaggagtcaagaaggaaaaagattggcgggcgagcttgcggacaagaatcaagaaaaccatcaagaaagccactaggactgagtaaattagccccagcagaggatatgactagtcacactcgaactacccaaaagatggatgataaatgtgtccacatccttaaagatgagaacactgccagtggtgaggagtcaccaaagcagtctagcggtaaaccagaagatacttcccatgcgaagaatgcatctcaagtagatattccctttcctggaccattgcaagtttcaaaatcaagtggctttgcatgggcaaaaaggcgtagagatgacacttcagttagatcccacagtcgatctatttctagaggatatatctttaattcatcagaagcttctacaataaattcaaggaataattctgaatccagaaactacggaaataaagaattttttgggctacgcacaaattctaggctcgccattcaaaatcaatggagtaagtttgatcgtccagattcgtttgatacttctgacgagtaccattcacaggaactatccacagcactttataacagacaagattcactatccaagagaagtaacctgagttaccaggatcaagcagaaaaggtagaattttcagggcctctactatgtcaaatgcacacagttgatgagctcttggaaagacatgagcgtcacatccggcgtgctgtcagaagatcatggtttcagagaggtaagaagcaagggaagtaa 1968 0.0 MGCVVAKQAVSVTPAVEHSVESDKNRKKKTESVGAAESGRASSNGGSESLSFRLGNLSKYVEAEQAAAGWPAWLCTVASEAIHGWVPLRADAFEKLDKIGQGTYSSVFRAKETETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSRPEIKFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGANLLVNNEGILKVADFGLANFSNSGKKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPEEYWKKTKLPHATLFKPQQPYDSCLRETFKDFHASSVNLLQTLLSVEPSKRGTASSALSLEYFNTKPYACDPSGLPIYPPSKEIDAKHEEESRRKKIGGRACGQESRKPSRKPLGLSKLAPAEDMTSHTRTTQKMDDKCVHILKDENTASGEESPKQSSGKPEDTSHAKNASQVDIPFPGPLQVSKSSGFAWAKRRRDDTSVRSHSRSISRGYIFNSSEASTINSRNNSESRNYGNKEFFGLRTNSRLAIQNQWSKFDRPDSFDTSDEYHSQELSTALYNRQDSLSKRSNLSYQDQAEKVEFSGPLLCQMHTVDELLERHERHIRRAVRRSWFQRGKKQGK 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02615 655 MobiDBLite consensus disorder prediction 19 34 - -
Pste6g02615 655 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Pste6g02615 655 Pfam Protein kinase domain 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02615 655 SMART serkin_6 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02615 655 MobiDBLite consensus disorder prediction 443 477 - -
Pste6g02615 655 Gene3D Phosphorylase Kinase; domain 1 80 175 - -
Pste6g02615 655 ProSiteProfiles Protein kinase domain profile. 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02615 655 MobiDBLite consensus disorder prediction 15 49 - -
Pste6g02615 655 PANTHER CELL DIVISION PROTEIN KINASE 91 381 - -
Pste6g02615 655 Gene3D Transferase(Phosphotransferase) domain 1 176 416 - -
Pste6g02615 655 CDD STKc_CDK9_like 93 377 - -
Pste6g02615 655 MobiDBLite consensus disorder prediction 505 519 - -
Pste6g02615 655 SUPERFAMILY Protein kinase-like (PK-like) 86 383 IPR011009 -
Pste6g02615 655 MobiDBLite consensus disorder prediction 393 521 - -
Pste6g02615 655 FunFam probable serine/threonine-protein kinase At1g54610 80 175 - -
Pste6g02615 655 FunFam probable serine/threonine-protein kinase At1g54610 176 416 - -
Pste6g02615 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Pste6g02615 655 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02615 Pste-Chr6 13548362 13553607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02615 85 435 Core Cell Cycle Gene Families AT5G10270 49.333 9.96e-115 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste6g02615 Pkinase 2.7e-69 CL0016