Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02613 atggcgctgttcagaagattcttctaccggaagccgccggatcggcttctggagatttccgagagagtttatgtttttgattgctgcttctccacggatgtcttggaagaagatgaatacagagtttacatgggggggattgtggctcagctacaggatcactttccagatgcttctttcatggtattcaacttcagagaaggagatagacgcagccaaatctctgacatattttctcagtatgacatgacagtaatggagtaccctcggcaatatgagggttgtccccttctgcctttagagatgatccatcacttcctgcgttcaagtgaaagttggttgtctttggaggggcaacagaatgtgcttttgatgcactgtgaaaggggaggttggcctgtgctggcatttatgctagctggtcttctgttatacagaaaacagtacagtggggagcagaaaactcttgaaatggtctacaaacaagctccaagagaactactacacattttatctcctttgaatccacagccttctcatttaagatatcttcaatatatttccagaagacatttgggttctgagtggccaccatcagaaacacccttatatttggattgtcttattcttagagtccttccattatatgatgatgaaaaaggttgcaggcctgttgtacgtgtttatggtcaggacacttcaattcctgccaatagaagttcaaagctacttttttcaacttcaatatccaaaaagcatgttcgccactacctacaggcagagtgtatgctcgtgaaaattgacatccgttgtcgtgttcaaggggatgtggttcttgagtgtgtacatttaagtgatgattttgttcgtgaggagttgatgtttagagttatgtttcatactgcatttgtgcggtcaaatattttgatgctgaaccgcgaagaaattgatatttcgtgggaggcaaaggacctatttcccaaggacttcaaagcagaggtgctttttttggacgctgatgctgttatacctgatctaaccacagtcacggtgagtgaagatgcaaatgagactgagagtgcagagacagaaagtgcttcacctgatgaattctatgaagttgaagagattttcagcagtgtaattgatgcacaggaaagtaagacagagtatgattctcatacttttcatgaaaatgtggtggataatgaaactcataaagaggtctggaggcaagagttggatcctcatacttttgaggattgtacgccagattacaggattccaaagcaggttgacaagatggattctggtatgaatgctgtgaaagacatctctattgatgacgtgcactataaatttgatgggagcatggattcagatcctcatgtagtgaaagacattgctgtggatgatggagaaattaagtcgacttccactgcagttatttctgatatggtaaaacctcctctggaaacgaaggaagttaccatggatatgcaccaagaattaacaattaagcaaaatgaatatgatgaagatatggaagcagtggaaaaggaattagactccaaggatgggcagcagatgtctgaattgtcagaacaaaaatctggtaaactacttggatctactgccaagaaacagcttccatctaacacaaagcctgtgggagatacattttcagcaaagcaaaagattaaactgcaagaaacccatggttttcaggcaaaacaagctaagccaaatgcagtaactaggtggattccttctaacaagggttcttatacaaattcaatgcatgtctattatccaccatcaaggaataacagtgcaccagctgcactgacaaatatctcctcctcaaaggagaaaatggaagatgcaaaaacaagatctttatctgctcctgttgtctctgctgttgttgtttctattgacaagacaaatgacctaaaaagccggaaggtgaccccttcaaaatcttctggcaatatagcagtagaaatagatgaaaaatttccatcattaccatcaattaaagagccatctttgcggtcagaaactcaagtagaacaacaaaactcagagccagtgcgacaacctaccacaccacctcctccccctccccctcctcctctacctcagagggtccatcacagtgccaccaccaccacctccactgccgccaccaccaccaccactttccattttaacatcacttacaaggcaacctgctacttctcttccttcctttccaaccccaccccgccccaccccacctccaccccattttttggacaaaataaatgcagcttagtaccttcccttttccctcagatcatggccctttggagtgggtacagtggccacttcacagcctcttcctccgccctgccacctccacctccacctccacctccacctccacctcagatgcctccttcaggtccgagtttcatccattcctcctttaacaccattagcatcaccacttccaaaacatgtaatcccatcaaatcctcctcctccttccatgtttcctctgctcaacacatgaggctccaccaccccctcccccacctccatttgcatcacataaacttcacctcaggcaccccaccttcactccatctgtctcgcctccccctcctctgccacccttggctagttcacatatatattcactacaccacctccttccttcgcctccccctcctttggggcttcactaccccatcaccaccaccatttccacctccttttgccaggctccactctggttgcctcctttgcatagctttcctccacctcccccacccttccttcatcagatgggtgacctccaccccacctccaccaccttttggtccatcaggtggaatcccacctccacctccacctatgccaggagccccacctcctccaatgtatggagtctcgcctcctccaccacctcctccaccactacctcctggtggtcaaggaccacctcctccaatgtatgtagcaccacctccacccccacttcctggtggtcgaggaccacctcctccacccccacctcctggtggtcgaggaccacctcctccacctcctccaatgtttggaggacctcctcctccacctcctcctatgtatggagcaccatctctgggtggtcaaggaccacctcctccacctcctccaatgtttggaggaccacctccaccaccaccacctcttggcggtcgaggagctcctcctccacctcctcctggtggtcgaggcgctcctggcgctcctcctcctcctgggggtggacctccaccacctccacccttaggttcaaaaggtgcaaatgttggagctgatccaagagggaggggacgtgggtatgcacgccctacaggacctggtgcaatggcaccccgacgatcctccttaaagcctttgcattggagcaaggttacaagggcactacaaggcagtttatgggaagaattacaaagacatggagaaccacaaattgcaccggagtttgatgtttcagagctagaaaagcttttctctacaaatgttccaaaacctaccgattctgccaaagctggagaccggcgcaagtctgttggatctaaaactgatagagtaaccttggttgatctaaggagggctaataatactgaaattatgctcactaaggtcaagatgccacttcctgaaatgatggctgcagtactggctatggatgagtcggtattggatgttgatcaagtggaaaatctcattaagttttgccctaccaaagaggagatggatcttttgaagggatatactggtgacaaggaggttttggggaagtgtgaacaggtcaaattgctggtgagggatatggagttgggtgccaaatttttattaattatcttcttgaatgctttaagattaaagttgagcctttctagaagtgctttggtgtggtttagtgtagaagattag 3975 0.0 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGDRRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHILSPLNPQPSHLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLYDDEKGCRPVVRVYGQDTSIPANRSSKLLFSTSISKKHVRHYLQAECMLVKIDIRCRVQGDVVLECVHLSDDFVREELMFRVMFHTAFVRSNILMLNREEIDISWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDANETESAETESASPDEFYEVEEIFSSVIDAQESKTEYDSHTFHENVVDNETHKEVWRQELDPHTFEDCTPDYRIPKQVDKMDSGMNAVKDISIDDVHYKFDGSMDSDPHVVKDIAVDDGEIKSTSTAVISDMVKPPLETKEVTMDMHQELTIKQNEYDEDMEAVEKELDSKDGQQMSELSEQKSGKLLGSTAKKQLPSNTKPVGDTFSAKQKIKLQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNISSSKEKMEDAKTRSLSAPVVSAVVVSIDKTNDLKSRKVTPSKSSGNIAVEIDEKFPSLPSIKEPSLRSETQVEQQNSEPVRQPTTPPPPPPPPPLPQRVHHSATTTTSTAATTTTTFHFNITYKATCYFSSFLSNPTPPHPTSTPFFGQNKCSLVPSLFPQIMALWSGYSGHFTASSSALPPPPPPPPPPPPQMPPSGPSFIHSSFNTISITTSKTCNPIKSSSSFHVSSAQHMRLHHPLPHLHLHHINFTSGTPPSLHLSRLPLLCHPWLVHIYIHYTTSFLRLPLLWGFTTPSPPPFPPPFARLHSGCLLCIAFLHLPHPSFIRWVTSTPPPPPFGPSGGIPPPPPPMPGAPPPPMYGVSPPPPPPPPLPPGGQGPPPPMYVAPPPPPLPGGRGPPPPPPPPGGRGPPPPPPPMFGGPPPPPPPMYGAPSLGGQGPPPPPPPMFGGPPPPPPPLGGRGAPPPPPPGGRGAPGAPPPPGGGPPPPPPLGSKGANVGADPRGRGRGYARPTGPGAMAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSTNVPKPTDSAKAGDRRKSVGSKTDRVTLVDLRRANNTEIMLTKVKMPLPEMMAAVLAMDESVLDVDQVENLIKFCPTKEEMDLLKGYTGDKEVLGKCEQVKLLVRDMELGAKFLLIIFLNALRLKLSLSRSALVWFSVED 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02613 1324 MobiDBLite consensus disorder prediction 677 728 - -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 531 559 - -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 682 699 - -
Pste6g02613 1324 PANTHER FORMIN-J 1 816 - -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 519 559 - -
Pste6g02613 1324 Pfam Formin Homology 2 Domain 1138 1303 IPR015425 -
Pste6g02613 1324 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Pste6g02613 1324 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 954 1143 - -
Pste6g02613 1324 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 795 817 - -
Pste6g02613 1324 Coils Coil 501 528 - -
Pste6g02613 1324 Gene3D Formin, FH2 domain 1134 1303 IPR042201 -
Pste6g02613 1324 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1209 1288 - -
Pste6g02613 1324 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Pste6g02613 1324 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 700 717 - -
Pste6g02613 1324 Gene3D - 206 336 - -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 797 817 - -
Pste6g02613 1324 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1132 1324 IPR015425 -
Pste6g02613 1324 SMART PTEN_C2_2 198 338 IPR014020 -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 1186 1205 - -
Pste6g02613 1324 MobiDBLite consensus disorder prediction 954 1110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02613 Pste-Chr6 13506174 13516257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02613 1 341 FH2 protein (formin) Gene Family AT2G25050 64.516 4.27e-156 499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02613 6 13506174 13516257 Pste6g02613 6 13506174 13516257 ECH