Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g02612 | atgaaggtgccaagggtagagtcaaaattaagagtattttcattcaagattcagtttggttgtcaggttacagaatttaagaagagtttaaacactgtgaactctgcctgtgaagaggtccggaattctgttaaattgaaggagataatgaagaaaattctttatttgggtaatacattgaatcaaggaacagcaaggggatctgcagttggattcaagttggatagtcttttaaagctgactgacactcgtgcttctaacagtagaatgacattgatgcattatctttgcaaggtcctagcggataagtcgccagggctccttgatttccacttagaccttgttagcctggaagcttccactaagatacaattgaagtcattagcagaagagatgcaggcaatcatcaaaggattagagaaggttaaacaagaatttgctgcatctgcaagtgatggacctgtctctgaagttttccataaggtgttaagcatttttatgtcagtctcttga | 513 | 0.0 | MKVPRVESKLRVFSFKIQFGCQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSRMTLMHYLCKVLADKSPGLLDFHLDLVSLEASTKIQLKSLAEEMQAIIKGLEKVKQEFAASASDGPVSEVFHKVLSIFMSVS | 170 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g02612 | 170 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1 | 170 | IPR015425 | - | |
| Pste6g02612 | 170 | PANTHER | FORMIN-J | 1 | 169 | - | - | |
| Pste6g02612 | 170 | Coils | Coil | 125 | 145 | - | - | |
| Pste6g02612 | 170 | Pfam | Formin Homology 2 Domain | 1 | 168 | IPR015425 | - | |
| Pste6g02612 | 170 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1 | 168 | - | - | |
| Pste6g02612 | 170 | Gene3D | Formin, FH2 domain | 1 | 170 | IPR042201 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g02612 | Pste-Chr6 | 13502187 | 13504747 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g02612 | 1 | 170 | FH2 protein (formin) Gene Family | AT5G07740 | 80.000 | 1.11e-86 | 275 |