Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02609 atgcaacagaactttcttcaatctttgactacgaacaaaaacacctctactcttccgtttccccaactgctgcatgcatgcatggatgcaccctctccaaccatctttcattttcttccccgtattcatgtacttatacccttcctctaccctcattgtggaacctcaacaatggaagcaaagaacaaaggaatcattacgaaacctactttatattttctgtcattcctttccatttttctttttagcctcgccaaatgtgactcttctttctcacctaatgttaaatatctcattgattgtggctcttcccaccccactcagcttaaagatggtagaacctttaaatctgatcttgaaacctcttctctcctttccacaactgaagatgtgaaaatatcacttaactcaaacctctccccttctgttccttctttatcacttcctttgtatcaaactgcaagagtttttcaagaggaatccaccttctccttttacatccccagaactggtagactttgggttcgtctctacttcttccctctccctgacccttcctataacctaacgagtgctgttttttctatccaaactaatcaccatgtgctcttgcaagagttttctgtgaggaacaatgactcacatgttttcaaggaatatcttattcacgtttctgatagtagattctccctcaaattcaagcctaagaaaaactcatttgcatttatcaacgccattgaggttgtttcagctcctgacactcttatatcagatttagcaactgctctttccccacttggagaattcaaagggttattgaattatgctcttgaggtatcctatagaataaacgttggtggtcccgccataactcctgacaatgacactttgtcaagaacatgggaaagtgatggttcatacaacatcttcccacaaggttccgaaattgtttctgtctccaacaaaaccatcaagtatcctcgtactggagatacacctttgattgctcctatcttagtttatgcaagtgttgtacacatgaaggaccctagagttatgcaaccaaatttcaatctcagttggatgatgaacgtggaaagcaactactcttatttgataagaatgcatttctgtgacattgtcagcaaaagtcttaacaagttatacttcaatgtgtacatcaaccggattgagggtgcgtcagctttggatctttcatcgcaaaccaaagctttagccactgccttttataaggactttgtgctaaacgcatcttttgtctcaaacggttccattttggttcaggtgggaccaaccaatcttcaacaaggcacggtcgatgcaattctgaatggaattgaggtgatgaagataagcaacaatgcaaagagcttggatggtttcttctctatagatggagcatacaaagggccaagttcaacaagcaaggtaatgaaaattttagcttgtgttggactagcattggttgtggcatcaatattgttactagcaatgatttgtataaggtggaaaaagaggcctcaaggttgggaaaatcataaaaggttcacatcgtggatcctccccattcactcaaaaatatggttttcaagcaaaagcagtagtcgaagctcaaccccatatagttcccacaaaagaaataagcgtggtgattgtgtctccccaaaagggctcgaaaggttcttcccctttaatgaaatgctccgtgccaccaataatttcgatgagaagagagtgataggaattggaggctttgggaaagtgtatcttggaatattggaggatgggacaaaggttgccataaaacgaggaagcgctagttcagaacaaggcatcaacgagttcagaacagaactagaaatgctgtcaaagctacgccatcgccacctagtctcacttatgggtttctgtgatgaaaattcagagatggttctagtgtatgagtacatggctaatggcccctttcgttcccacctttatggcttcaacctccctcctttgacatgggaaaagagacttgaaatatgcattggtgcagctcgtggcttgcactatctccacactggtgcagctcaaagcatcacacatcgtgatgtgaagaccacaaacatcctcttagatgagaattatgttgccaaggtttctgactttggtttgtcaaaagttgtcccagagaaagcgcaagtcagcacagctgtgaagggtagtcttgggtaccttgaccctgagtattataggagccagcaactaactcaaaaatctgatatatactctttcggggtagttctatttgaggtactttgtgccaggccagttatttgccctacactaccaagagagcagactaacttggctgaatgggcaataaaacaacacaaaagaggagtgctccatgaagtaagtgatccacatattgttgagactatatgtcctcaatcgtttgatctttttgtacaaattgctgagagatgcttggctgattgtggtgttgataggcctagcatgggggatgtgttgtggcatttagaatattctttgcgcctacaagaagccgccacacgaattaaagaacgtaaagataaaagtacaaatatagcctcaaatgaatatattaatcataatatagcaggtcactcgggtgatctagcaagtgatgtgtctgataccacagatattaattctactttgttttctcagatagcaaacttacagggaaggactacagaagttggattagttgtgccactcttccttgctactaatattgaattcagaagtttatatggatcaacctctaggcatggtcatgcaacatga 2838 0.0 MQQNFLQSLTTNKNTSTLPFPQLLHACMDAPSPTIFHFLPRIHVLIPFLYPHCGTSTMEAKNKGIITKPTLYFLSFLSIFLFSLAKCDSSFSPNVKYLIDCGSSHPTQLKDGRTFKSDLETSSLLSTTEDVKISLNSNLSPSVPSLSLPLYQTARVFQEESTFSFYIPRTGRLWVRLYFFPLPDPSYNLTSAVFSIQTNHHVLLQEFSVRNNDSHVFKEYLIHVSDSRFSLKFKPKKNSFAFINAIEVVSAPDTLISDLATALSPLGEFKGLLNYALEVSYRINVGGPAITPDNDTLSRTWESDGSYNIFPQGSEIVSVSNKTIKYPRTGDTPLIAPILVYASVVHMKDPRVMQPNFNLSWMMNVESNYSYLIRMHFCDIVSKSLNKLYFNVYINRIEGASALDLSSQTKALATAFYKDFVLNASFVSNGSILVQVGPTNLQQGTVDAILNGIEVMKISNNAKSLDGFFSIDGAYKGPSSTSKVMKILACVGLALVVASILLLAMICIRWKKRPQGWENHKRFTSWILPIHSKIWFSSKSSSRSSTPYSSHKRNKRGDCVSPKGLERFFPFNEMLRATNNFDEKRVIGIGGFGKVYLGILEDGTKVAIKRGSASSEQGINEFRTELEMLSKLRHRHLVSLMGFCDENSEMVLVYEYMANGPFRSHLYGFNLPPLTWEKRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYVAKVSDFGLSKVVPEKAQVSTAVKGSLGYLDPEYYRSQQLTQKSDIYSFGVVLFEVLCARPVICPTLPREQTNLAEWAIKQHKRGVLHEVSDPHIVETICPQSFDLFVQIAERCLADCGVDRPSMGDVLWHLEYSLRLQEAATRIKERKDKSTNIASNEYINHNIAGHSGDLASDVSDTTDINSTLFSQIANLQGRTTEVGLVVPLFLATNIEFRSLYGSTSRHGHAT 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02609 945 SMART serkin_6 581 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02609 945 Pfam Malectin-like domain 99 458 IPR024788 -
Pste6g02609 945 Pfam Protein tyrosine and serine/threonine kinase 584 779 IPR001245 GO:0004672|GO:0006468
Pste6g02609 945 SUPERFAMILY Protein kinase-like (PK-like) 563 850 IPR011009 -
Pste6g02609 945 PANTHER OS07G0166700 PROTEIN 567 856 IPR045272 GO:0004714|GO:0006468
Pste6g02609 945 Gene3D Transferase(Phosphotransferase) domain 1 657 879 - -
Pste6g02609 945 FunFam receptor-like protein kinase FERONIA 541 656 - -
Pste6g02609 945 FunFam Receptor-like protein kinase FERONIA 276 460 - -
Pste6g02609 945 ProSiteProfiles Protein kinase domain profile. 581 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02609 945 CDD STKc_IRAK 587 850 - -
Pste6g02609 945 FunFam Receptor-like protein kinase FERONIA 657 871 - -
Pste6g02609 945 MobiDBLite consensus disorder prediction 539 559 - -
Pste6g02609 945 Gene3D - 275 460 - -
Pste6g02609 945 Gene3D - 92 252 - -
Pste6g02609 945 Gene3D Phosphorylase Kinase; domain 1 541 656 - -
Pste6g02609 945 FunFam Putative receptor-like protein kinase 96 252 - -
Pste6g02609 945 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Pste6g02609 945 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02609 Pste-Chr6 13478492 13482607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02609 84 870 Receptor kinase-like Gene Family AT5G61350 58.229 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pste6g02609 Malectin_like 8.2e-36 CL0202