Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02599 atggtagttgtggtagttgttaatgcagctggggccctcacaggagctatagctggtgctttagctgcaaaggctaccaagagtggtcttctccggggaatttcattgggtgcaattgccggctctatactctcagtggaggtgttggaagcttcccgtgcctattggtgcatggagcaaactggctcacggggtgcatcatcaatggcagatttcatagaggaacttgttcgagggaggcttgttgaggaatcccttacacctgctattttaactgcttacaatttgcaggttggcattgctaatgcaggctatgatgagattcatgatgttcatggcttagtggcacccagaggattgtcaggagattcattgaagaggttaccacaccatatgatctcaaaagatatggaaacagagaatacttgttgtgcagtatgtttgcaggatattgaagtaggcgaaattgcaagaagcttacctcgctgtcatcatacatttcacttgatatgtgtggacaaatggcttgtcaagaatgattcatgtcctgtctgcagacagaatgtgtaa 570 0.0 MVVVVVVNAAGALTGAIAGALAAKATKSGLLRGISLGAIAGSILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQVGIANAGYDEIHDVHGLVAPRGLSGDSLKRLPHHMISKDMETENTCCAVCLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02599 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 189 IPR013083 -
Pste6g02599 189 SMART ring_2 144 185 IPR001841 -
Pste6g02599 189 Pfam Ring finger domain 144 186 IPR001841 -
Pste6g02599 189 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Pste6g02599 189 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 2 188 IPR044523 -
Pste6g02599 189 SUPERFAMILY RING/U-box 125 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02599 Pste-Chr6 13373356 13376805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02599 6 189 C3H Transcription Factor Family AT1G74410 56.757 7.75e-72 215
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02599 6 13373356 13376805 Pste6g02599 6 13373356 13376805 ECH