Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02570 atggagtctcagccacttattggttggagctctttctacgaaatagatgaaaaaccatttccatttacgtgccaattttcttacagcgaaaatggtgcagcgtatcctgcacaggattggacgtacgattttcccatacaggaccaatatcttgatgctgttcctctaatggagttttacccttcagatcctttgtatgaaactctcagcattgaaccaacacaaagcgtgagagactatgatttttacgatattacaaaggggttgtctgtctggaaagaagttgatgcggtgtttgattcagaaaaaatgctgatgtttcgcaacaatgaagaaagcgggagcgggaaggaaatgaaggaagatggaaaagataatggaggaagagaagagagaattagcagtagcagaatgttatcaaggaagaccatatctcagtacttctacatgcccataacacaagcagccagagaacttaatgtgggcctgacacttttgaagaaaaggtgcagagagttgggcattcgaaggtggccccacaggaagctgatgagcttgcaaaccctgataaataatgtgcaggagcttgggaaagatgaggggccggagagtgaagagaagttaagaagtgcgattgacatattggagagggaaaagaagctgttggaggaaatgccagatgttgaacttgaagacaatacaaagaggcttagacaggcgtgtttcaaggccaactacaagaagagaaagctctcagtgctggtggaaccacactcttctttcagtgacacaatgggagaatatagttatgaaagtgaagaagaacgagacatcaagtatttgttgtcacagttaacatag 861 0.0 MESQPLIGWSSFYEIDEKPFPFTCQFSYSENGAAYPAQDWTYDFPIQDQYLDAVPLMEFYPSDPLYETLSIEPTQSVRDYDFYDITKGLSVWKEVDAVFDSEKMLMFRNNEESGSGKEMKEDGKDNGGREERISSSRMLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKDEGPESEEKLRSAIDILEREKKLLEEMPDVELEDNTKRLRQACFKANYKKRKLSVLVEPHSSFSDTMGEYSYESEEERDIKYLLSQLT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02570 286 PANTHER PROTEIN RKD4 128 252 IPR044607 GO:0003700
Pste6g02570 286 Pfam RWP-RK domain 139 186 IPR003035 -
Pste6g02570 286 Coils Coil 205 225 - -
Pste6g02570 286 ProSiteProfiles RWP-RK domain profile. 120 206 IPR003035 -
Pste6g02570 286 MobiDBLite consensus disorder prediction 110 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02570 Pste-Chr6 13123547 13125185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02570 129 257 AtRKD Transcription Factor Family AT1G18790 68.182 1.47e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pste6g02570 RWP-RK 4.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02570 6 13123547 13125185 Pste6g02570 6 13123547 13125185 ECH