Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02537 atgggaaattattgctttggaactcgttgcaatgacactttgaactcgcacccctgttctgatgctaccaatgttcatagaagcacccaattgttagttcattcaagtccaaacgggtatggatacagtgatgaaggtaaacctgagattctccccactccaagatctgaaggggacatactttcatccccacatttaaaaccattcacattatgtgaacttaagaaggccactagaaatttccagcctgatcgtctaattggagaagggggatttggttatatctataaggggtgcattaatgatggaatggttatagccgtgaagaagcttaagcctgaaggttttcaagggcataaggagtggctgtctgaagtcaattatcttggacaacttcgccatccaaatcttgtcaaacttattggatactgcctagaaggagataaccggcttctagtgtacgagtacatgcccaatagaagcttggaagatcatatgtttcgcaagggcacgcaaccacttccttgggcaagaagaatcaagattgctattggtgctgctcgaggtctctccttcctacatgactctaggcaacaaattatctaccgtgattttaagccttctaatattttgttagattcggaatttaatgcaaaactctcggactttgggttggccaaagcagggcccactggtgatcattcttatgtttccactcaagtcctgggcactcatggctatgctgctcctgaatatattgctacaggtcggttgacttcaaagtgtgatgtctacagctttggggttgtgctattggaactactatcagggcgttatgcaattgataacacaaaatctggagtggaacataatctggtagaatggtcaagaccctatttgggagataggaggaagttgtttcggattatggacaccaagttagaagggcaatacccgcagagggcagcttatactgtagcaatcattgccttacaatgcattagtgatgcaaagactagaccacaaatgtctgaggttttgtctgccttggaacacctaccagccattagacattcagctagcccatctagagaagagaagcccatgaaaattcccattagagaggctataaatccccctgtgaaattgccattgagacataaccatcctcaacaaagtcaagagatgtga 1191 0.0 MGNYCFGTRCNDTLNSHPCSDATNVHRSTQLLVHSSPNGYGYSDEGKPEILPTPRSEGDILSSPHLKPFTLCELKKATRNFQPDRLIGEGGFGYIYKGCINDGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLRHPNLVKLIGYCLEGDNRLLVYEYMPNRSLEDHMFRKGTQPLPWARRIKIAIGAARGLSFLHDSRQQIIYRDFKPSNILLDSEFNAKLSDFGLAKAGPTGDHSYVSTQVLGTHGYAAPEYIATGRLTSKCDVYSFGVVLLELLSGRYAIDNTKSGVEHNLVEWSRPYLGDRRKLFRIMDTKLEGQYPQRAAYTVAIIALQCISDAKTRPQMSEVLSALEHLPAIRHSASPSREEKPMKIPIREAINPPVKLPLRHNHPQQSQEM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02537 396 SUPERFAMILY Protein kinase-like (PK-like) 59 351 IPR011009 -
Pste6g02537 396 MobiDBLite consensus disorder prediction 359 396 - -
Pste6g02537 396 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 157 365 - -
Pste6g02537 396 Gene3D Transferase(Phosphotransferase) domain 1 157 371 - -
Pste6g02537 396 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Pste6g02537 396 Pfam Protein kinase domain 82 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02537 396 Gene3D Phosphorylase Kinase; domain 1 53 156 - -
Pste6g02537 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pste6g02537 396 PANTHER OS01G0588500 PROTEIN-RELATED 45 353 - -
Pste6g02537 396 CDD STKc_IRAK 87 353 - -
Pste6g02537 396 FunFam Serine/threonine-protein kinase BIK1 51 156 - -
Pste6g02537 396 ProSiteProfiles Protein kinase domain profile. 81 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02537 Pste-Chr6 12615711 12619986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02537 67 353 Glycoside Hydrolase AT3G07070 52.740 9.09e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste6g02537 Pkinase 2.8e-47 CL0016