Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g02526 | atggggaagtcaccaggaaaatggatcaaaactgtcctatttggaaaaaagtcatccaaatcaaatattgcaaaaggcagagaggttgttaatcaaaaagaaggagtagtagttgcctccaaggtgcccgaaactggtttggctttagaaccaacctccaatactattgccagacatgaggaaaatatagggctggaaaataacaaagcagaaaatgttttacctggaaatcaagaaatagacacagtgggatctattaatgaagatgctgcactagatccagagaaaatgaggcaagaggaagcagcgacaaaggcacaggctgctttcaggggttatttggctcggagagcatttagggccctaaaaggcataataaggttgcaagcactcatccgtgggcacttggttaggagacaagctgttgctacattatgctctacgtattgtattgtcaagtttcaagcaattgttcgtggaggaagagttaggaagtccaatattggatttgaaatccgtgaaaagtgcaatatactggatggcaaacttgtcaagccaattgctatatccacgaaaattacgaagctttcagcaaatgctttcattcataagcttcttacttcatcaactactataatggcactgcgtttgcaatatgttcctggtgatccaaattcagttctaagttggttggaccgctggtcatcatctcacttttggaaaccagttccccaacccaagagaattcgggacactaagtctcagagaaagcatagcaatatttcagttggagataatcagatgagcaagtccagacgtaccaacaggaagcttcctactgcaagttttgactcagtcccagcgcaagcaaatcctgagtttgaaaaaccaaaacgaaacacaaggaaaattccaagccaatcctcagattttctgcaggaaaatccacaaagtgagcttgaaaaggttaaacgtaacttgagaaaggttcataacccggttgttgagaatgctgctccatcagaagttgaatctgagatgccaaagcagcatttggaaaaggctacagttaccacatcccttactgttccagaacaagagatcattagttctaatgagaagatcaagaaggaagcaacaataactgtttccagtgtcccagatatagaaactactccaagactttcagttagtaaggaggtgactttggaatcaaagcccccgactgcggaaccaaagcccccgactgcggaaccaaagcccttgactgagattacgactaaagataaaaacatttctgatgaagtaaagaatgagcccatttttttaccagagcctatttgtaaagatgaaaattctcacttaaatggagatttgagtcacaaggaagatccaataggcagtgaaaaccagaaaccaaaccgaaaagcctcaattgtagcaaagcaggagcgtgcagagaatggtatacagaacagtccaaccttaccgagttacatggctgcaactgaatctgcaaaggcaaagttgagggcacaaggatccccaagatttggacaggacggaattgaaaaaaacaaccataccaggcgacattctctgccatccctaactaacagcaaaattagctcacattcacctaggacacagagaccagttcaatcaggtggcagaactgtatcatcttctagagatggaaatggaaaggtaattcaagccgagtggaggaggtaa | 1734 | 0.0 | MGKSPGKWIKTVLFGKKSSKSNIAKGREVVNQKEGVVVASKVPETGLALEPTSNTIARHEENIGLENNKAENVLPGNQEIDTVGSINEDAALDPEKMRQEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCSTYCIVKFQAIVRGGRVRKSNIGFEIREKCNILDGKLVKPIAISTKITKLSANAFIHKLLTSSTTIMALRLQYVPGDPNSVLSWLDRWSSSHFWKPVPQPKRIRDTKSQRKHSNISVGDNQMSKSRRTNRKLPTASFDSVPAQANPEFEKPKRNTRKIPSQSSDFLQENPQSELEKVKRNLRKVHNPVVENAAPSEVESEMPKQHLEKATVTTSLTVPEQEIISSNEKIKKEATITVSSVPDIETTPRLSVSKEVTLESKPPTAEPKPPTAEPKPLTEITTKDKNISDEVKNEPIFLPEPICKDENSHLNGDLSHKEDPIGSENQKPNRKASIVAKQERAENGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGIEKNNHTRRHSLPSLTNSKISSHSPRTQRPVQSGGRTVSSSRDGNGKVIQAEWRR | 577 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 532 | 568 | - | - | |
| Pste6g02526 | 577 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 543 | - | - | |
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 451 | 470 | - | - | |
| Pste6g02526 | 577 | Pfam | Protein of unknown function (DUF4005) | 483 | 559 | IPR025064 | - | |
| Pste6g02526 | 577 | SMART | iq_5 | 98 | 120 | IPR000048 | GO:0005515 | |
| Pste6g02526 | 577 | SMART | iq_5 | 121 | 142 | IPR000048 | GO:0005515 | |
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 485 | 500 | - | - | |
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 242 | 350 | - | - | |
| Pste6g02526 | 577 | ProSiteProfiles | IQ motif profile. | 99 | 127 | IPR000048 | GO:0005515 | |
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 317 | 331 | - | - | |
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 244 | 258 | - | - | |
| Pste6g02526 | 577 | Pfam | IQ calmodulin-binding motif | 101 | 120 | IPR000048 | GO:0005515 | |
| Pste6g02526 | 577 | Pfam | IQ calmodulin-binding motif | 123 | 140 | IPR000048 | GO:0005515 | |
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 259 | 287 | - | - | |
| Pste6g02526 | 577 | Gene3D | - | 95 | 148 | - | - | |
| Pste6g02526 | 577 | ProSiteProfiles | IQ motif profile. | 123 | 149 | IPR000048 | GO:0005515 | |
| Pste6g02526 | 577 | MobiDBLite | consensus disorder prediction | 392 | 577 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g02526 | Pste-Chr6 | 12507449 | 12517024 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g02526 | 1 | 577 | IQD Protein Family | AT1G74690 | 43.089 | 5.93e-115 | 352 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste1g00884 | 1 | 2722640 | 2728756 | Pste6g02526 | 6 | 12507449 | 12517024 | ECH | |
| Pste7g00889 | 7 | 8200191 | 8207544 | Pste6g02526 | 6 | 12507449 | 12517024 | ECH | |
| Pste6g02526 | 6 | 12507449 | 12517024 | Pste6g02526 | 6 | 12507449 | 12517024 | ECH | |
| Pste1g00884 | 1 | 2722640 | 2728756 | Pste6g02526 | 6 | 12507449 | 12517024 | PCT |