Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02507 atgtttaagcttttggttactagagctgtcggggtttccaattcacgcaaccacaatgcatttacttctttctgttactctaggtgtgttcattcattaccatttgcaactgtagaagcagaagagatatcaggctctaggcctgctgaagtttttaatctggtgcaaggcaaatgggtaggatcttcaaattggactacagttgtggatcctttaaatggagactcatttattaaagttgctgaagttgatgaaacaggcattcagccctttgtgaaaagcttgtccagctgtcccaaacatggtgtacacaatccatttaaggcaccagagagatatctcatgtttggagagatatctgctaaggcggctcacatgttatcacttcctaaggtttcagatttctttacaaggttaatacaaagagtttctccaaagagttaccagcaggcttttggggaagtctatgtgacacaaaagtttctagagaatttttgcggagatcaggttcgtttcctggcgagatcttttggtgtacctggaaatcatcttggacaacaaagtcacggttttcgttggccatatggtcccgtggcaattattactccttttaattttcccttagagattcctctccttcaattgatgggtgcactttatatgggcaacaagccaatccttaaagttgatagcaaggtgagcattgttatggaacaaatgttgcacctgcttcatacctgtggcttacctgctgaagatgttgacttcataaattctgatgggaagataatgaacaagctgttactggagggaaatccccgaatgactctttttactggtagttcaagagtggcagagaagttagctgttgatttgaagggccgtgttaaattggaagatgctggatttgactggaaaatattgggccctgatgtccatcaggaagattacatagcatgggtctgtgatcaggatgcatatgcatgcagtggtcagaaatgctcagcgcaatcattgttatttatgcatgagaactggtctaaaactcccttgctatcgaagttgaaagatctagctgagagaagaaagttggcagacttgacagtcggccctgttctcacagttactactgattcaatgttagaacacacgaataagttgcttgagataccgggatcaaagctgctgtttgggggtcaacctttagagaatcattcaattccacctatttatggtgctattaaaccaacagctgtctatgttcctcttgaggaaattatgaatgataagaattttgagcttgttacaaaagaaatatttggaccctttcaggttattaccgattacaaagacagtcaactatcagttgtattggatgctgtggaaagaatgcataaccatttaacagctgcagtagtttcaaacgatcctttgtttttacaggcaaggatttttttactcaaacttatggaggtcatcggcaaatcagtaaatggtactacttatgctggtttaagagcaagaacaactggagctccacaaaatcactggtttggacccgctggtgatgctagaggtgcaggaattggaacaccagaggctatacaacttgtatggcaagttacaggcattgcgattatctgttttgatgatggtggcacaaggtggttcatggtggctgtgttttgcagtggaatgttgagggcatggaggagggaggatggttgtttaactaacatgctcaacaacaacgagtgggtatggatgaaccatcactcactatttgtcaaaagtcggatttaccctccgacacagtcaccaacttccttacactcattagtcattcatatagcaccgctgattttcccaaaaacaacgcaacacacacaatctgaacgttattcaagtctcgacgagaaaccaggaagggctcaggagttctttgctgctgatggatctgtactttcccaaaaaggccactgtcgcagaccacacgcgtaa 2001 0.0 MFKLLVTRAVGVSNSRNHNAFTSFCYSRCVHSLPFATVEAEEISGSRPAEVFNLVQGKWVGSSNWTTVVDPLNGDSFIKVAEVDETGIQPFVKSLSSCPKHGVHNPFKAPERYLMFGEISAKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPLLQLMGALYMGNKPILKVDSKVSIVMEQMLHLLHTCGLPAEDVDFINSDGKIMNKLLLEGNPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTPLLSKLKDLAERRKLADLTVGPVLTVTTDSMLEHTNKLLEIPGSKLLFGGQPLENHSIPPIYGAIKPTAVYVPLEEIMNDKNFELVTKEIFGPFQVITDYKDSQLSVVLDAVERMHNHLTAAVVSNDPLFLQARIFLLKLMEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIQLVWQVTGIAIICFDDGGTRWFMVAVFCSGMLRAWRREDGCLTNMLNNNEWVWMNHHSLFVKSRIYPPTQSPTSLHSLVIHIAPLIFPKTTQHTQSERYSSLDEKPGRAQEFFAADGSVLSQKGHCRRPHA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02507 666 FunFam probable aldehyde dehydrogenase 44 302 - -
Pste6g02507 666 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 303 IPR016162 GO:0016491
Pste6g02507 666 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 546 IPR044638 GO:0004029
Pste6g02507 666 Pfam Aldehyde dehydrogenase family 66 477 IPR015590 GO:0016491
Pste6g02507 666 SUPERFAMILY ALDH-like 53 481 IPR016161 GO:0016491
Pste6g02507 666 FunFam Aldehyde dehydrogenase 12 310 507 - -
Pste6g02507 666 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Pste6g02507 666 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 492 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02507 Pste-Chr6 12385319 12394892 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02507 1 539 Aldehyde Dehydrogenase Gene Family AT5G62530 76.384 0.0 886