Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02505 atggcctccacactttttgttgtgtatgttttgcctacttgccaccgctggaacgtcacaaacttggcgctcaatctatacaatgtgcctttattggttatacccctaatcaaaaaggatttttatgttatgatgctactgctcagcacttgtgcaaatcctggaatgtggcacttcaggaaaattatacttaggatattgtttcctgtgtccaactgtactaaacccattgattgcaaatgggtgtattctgtgaagctgaattcagatggatctctcaatcgattcaaggcccgattagttgctttgggcaacaaacaagaatatggagtgtactatgatgaaacatttgcccccatggctaaaatgacttctgtgagaaccatcctttctgtcgccgcatccaaaggctggtcagtccatcaaatggatgtgaagaatgcctttctccatggtaacctcgcagaagatatctatatgactcccccctcctctttgctatatggattgcaccaagctccttgtgcatggtttgaaaagtttcaatctactgctcttggattctcttttactcaaggtcaatatgactcttctttgttcatacatcacaatacaactggcattgttatccttctcatttacgtcgataacatggtcgttacaagctttaatcaggcctcctttcatatgaaggatcttggtcatctccattcgtttttggccattgaggtccattcgacatcccaaggtatatttctcaattggcataagtatattgaggatttaatctctctggatggtctccaattagatgttcctgatgatactcctcttgagattaatgttaaatatcaccatgatgaggtgagcattgttatggaacaaatgttgcgcctgcttcatacctgtggcttacctgtagaagatgtagacttcataaattctgatgggaagacaatgaacaagctgttgctggaggcaaatccacgaatgaccctttttactggtagttcaagagtagcagagaagctggctgttgatttgaagggccgtgttaaattggaagatgctggatttgactggaaaatattgggtcctgatgtccatcaggaagattacatagcatgggtctgtgatcaggatgcatacgcatgcagtggtcagaaatgctcggcgcaatcattgttatttatgcatgagaactggtctaaaacttcattgctatctaagttgaaagatcttgctgagagaagaaagctaaaagatttgacaatcggcccagtcctcacagttacaactgatgcaatgctatcacacacgaataaattgcttgagatacctggatcaaagctgctcttcgggggtcaacctttagagggtcattcagttccacctatttatggtgctattaaaccaacagctgtttatgttcctctggacgaaattatgaaggataagaattttgagcttgtaacaaaagaaatatttggaccctttcagattataactgattacaaaaacagtcaactatcagttgtattagatgctgtggaaagaatgcataaccatttaacagctgctgcagtttcaaatgatcctttatttctacaggaagttattggcaaatcagtgaacggtactacttatgctggtctaagagcaaggacaacaggagctcctcagaatcattggtttggacctgctggtgatgctagaggcgcaggaattggaactccggaggctataaaacttgtatggtcttgccacagagaaattatatatgattttgggcctgtaccaaaggattggaaaacccctccatctacttga 1830 0.0 MASTLFVVYVLPTCHRWNVTNLALNLYNVPLLVIPLIKKDFYVMMLLLSTCANPGMWHFRKIILRILFPVSNCTKPIDCKWVYSVKLNSDGSLNRFKARLVALGNKQEYGVYYDETFAPMAKMTSVRTILSVAASKGWSVHQMDVKNAFLHGNLAEDIYMTPPSSLLYGLHQAPCAWFEKFQSTALGFSFTQGQYDSSLFIHHNTTGIVILLIYVDNMVVTSFNQASFHMKDLGHLHSFLAIEVHSTSQGIFLNWHKYIEDLISLDGLQLDVPDDTPLEINVKYHHDEVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLKDLTIGPVLTVTTDAMLSHTNKLLEIPGSKLLFGGQPLEGHSVPPIYGAIKPTAVYVPLDEIMKDKNFELVTKEIFGPFQIITDYKNSQLSVVLDAVERMHNHLTAAAVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDFGPVPKDWKTPPST 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02505 609 SUPERFAMILY ALDH-like 286 556 IPR016161 GO:0016491
Pste6g02505 609 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 287 609 IPR044638 GO:0004029
Pste6g02505 609 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 74 268 IPR013103 -
Pste6g02505 609 SUPERFAMILY DNA/RNA polymerases 69 258 IPR043502 -
Pste6g02505 609 FunFam Aldehyde dehydrogenase 12 366 554 - -
Pste6g02505 609 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 383 394 IPR016160 GO:0016491
Pste6g02505 609 Pfam Aldehyde dehydrogenase family 287 550 IPR015590 GO:0016491
Pste6g02505 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 282 360 IPR016162 GO:0016491
Pste6g02505 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 363 552 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02505 Pste-Chr6 12371745 12376962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02505 288 609 Aldehyde Dehydrogenase Gene Family AT5G62530 81.115 0.0 570