Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02503 ATGCAATTCAGGCTCGGCAAGCGCGTGATCCGGGTCGGCAAATGGGTCTGCCGTCGCGTCAGGCTCGCGACCTCAACCCGACCCGGATACCAACGTCTTAGGTCAGCTTCCGACCGTTCTAGGAATCCCATGTCAAAGCTTCTCACGTGGGGGCAACAATTGAAAAGAGGAGCACGGTCGCTCTGTAGGAAAGCTGGTGTGGGTTACCTACCAATCGGGTCGGATCCGGTTTGCAATAAGGGTCCAGCGGTGCCGAAGGGGCACTTGGCGGTGTACGTGGGGGAGGAGGACGGCGAGTGCCGCCGTGTTTTGGTGCCGGTGATTTACTTCAACCACCCTCTGTTCAGCGATTTGCTGAGGGAAGCGGAGAAGAAGTTCGGGTTCGAACACCCCGGTGGGATCACGATTCCGTGTCGGCTGACTGAGTTTGAACGGGTTGCCGTCATTGTTTTTGTGGGCATTTGTTCAGATGGTGTTAGGCTTTGGCTGTTTATGTACTTATCTGATGGGACCCGGCTGTAA 522 0.5613 MQFRLGKRVIRVGKWVCRRVRLATSTRPGYQRLRSASDRSRNPMSKLLTWGQQLKRGARSLCRKAGVGYLPIGSDPVCNKGPAVPKGHLAVYVGEEDGECRRVLVPVIYFNHPLFSDLLREAEKKFGFEHPGGITIPCRLTEFERVAVIVFVGICSDGVRLWLFMYLSDGTRL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02503 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 59 146 IPR003676 GO:0009733
Pste6g02503 173 Pfam Auxin responsive protein 79 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02503 Pste-Chr6 12361734 12362429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02503 82 143 Calmodulin-binding Proteins AT3G43120 50.000 8.88e-16 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02503 6 12361734 12362429 Pste6g02503 6 12361734 12362429 ECH