Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02499 TCAAAATCTCAAATAAAACCTCTATTTTTTAAACCCCCAAAAAGCACCACTTTTGGCCATAGCTAGGCTAGTCCTCACTATGGCACCATCATTGAGATTAATAGTAACCCTTCTAATTGCTCCCTTTCTATTCTCCTCCCTTGCTTTATCTTACTCATTGAAAGACATTCAATCATGGTGCAACCAAACCCCTTACCCTAAGCCATGTGAGTACTACTTGACCAACCATGCCTTCAACAAACCCATAAAAAACAAATCTGATTTCTTCAAAGTGTCCCTTGAACTAGCCCTAGAGAGAGCAAAAAGAGGTGAACTCAACACCCATTCACTAGGCCCAAAGTGCCGCAATGTCCATGAAAAAGCTGCATGGACAGATTGCATTGAACTCTATGAGTACACTATCCAAAGACTCAACAAAACCGCTAGCCCTCACACCAAATGCACCCAAACCGACACACAAACATGGCTCAGCACAGCCCTCACAAACCTTGAAACATGCAGAACAGGTTTCTATGAACTTGGTTTCCCAGATTATATCCTACCCTTGTTGTCCAATAATGTAACAAAGTTACTAAGCAACACCCTCTCTCTCAACAAGGGTCCTTACCAATACAACCCACCAAGTTACAAAGAAGGGTTCCCAACATGGGTGAAGCCAGGTGACAGAAAATTGTTGCAATCTTCAGCAGCTTCTAAGGCTAATGTGGTGGTGGCAAAAGATGGATCTGGCAAATACACAACAGTGAAAGCAGCTGTTGATGCTGCTCCAAAGAGTAACAGTGGAAGGTATGTGATATATGTGAAGGCTGGTGTGTACAATGAACAAGTTGAGGTAAAAGCAAGTAACATAATGTTGGTTGGAGATGGTATTGGAAAGACCATAATCACAGGTAGCAAAAGCGTTGGAGGAGGCACCACAACCTTCCGTTCTGCCACTGTTGCTGCTGTGGGAGATGGATTTATTGCCCAAGACATTACATTTAGGAACACAGCAGGAGCAGCAAATCACCAAGCTGTGGCATTCCGTTCTGGTTCTGATCTCTCAGTATTCTACAGATGCAGCTTTGAGGGTTACCAAGACACACTATATGTCCATTCAGAGAGACAATTCTACAGAGAATGTGACATATATGGCACAGTGGATTTCATTTTTGGCAATGCTGCAGTGGTTTTGCAAAACTGCAACATCTATGCAAGAACCCCTCCACAAAGAACCATCACAGTCACTGCTCAAGGCAGAACTGACCCAAACCAAAACACAGGAATCATCATCCACAATTCCAAGGTCACAGGTGCGTCGGGATTCAACCCTAGTTCAGTCAAATCATACCTAGGAAGGCCTTGGCAGAAGTACTCAAGAACAGTGTTCATGAAGACTAATCTTGACAGTTTGATCAACCCTGCTGGTTGGATGGAATGGGATGGTAACTTTGCCCTAGACACTTTGTACTATGCAGAATATGCTAATACTGGTCCTGGCTCCAACACTGCCAATAGGGTCACATGGAAGGGTTACCATGTTCTCACTAGTGCTTCTCAGGCCTCACCTTTCACTGTTGGAAACTTCATTGCTGGTAACTCTTGGATTCCAAGCACTGGTGTCCCTTTCACCTCTGGACTTTAAATATATCTTTTCATTAATTAGAAGTTGGTACACCTTGTGATTAGTTTCAATTTCTATTGTATTCATATTCATCTTTAATTATTTGCCCATCCAAATGTATATCTTTTGGCCGTACTAGAGAATAAAGCAATGAAAAATAAGTTGGTACTGCCGCAAGTTGTATTTGTGTTAAAAAATATAATGTTACTTGATTTAAAGAAATGTAATTGCTGGAAGAATTTTATTGTTTGTCTA 1858 0.4171 MAPSLRLIVTLLIAPFLFSSLALSYSLKDIQSWCNQTPYPKPCEYYLTNHAFNKPIKNKSDFFKVSLELALERAKRGELNTHSLGPKCRNVHEKAAWTDCIELYEYTIQRLNKTASPHTKCTQTDTQTWLSTALTNLETCRTGFYELGFPDYILPLLSNNVTKLLSNTLSLNKGPYQYNPPSYKEGFPTWVKPGDRKLLQSSAASKANVVVAKDGSGKYTTVKAAVDAAPKSNSGRYVIYVKAGVYNEQVEVKASNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAAVGDGFIAQDITFRNTAGAANHQAVAFRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIYARTPPQRTITVTAQGRTDPNQNTGIIIHNSKVTGASGFNPSSVKSYLGRPWQKYSRTVFMKTNLDSLINPAGWMEWDGNFALDTLYYAEYANTGPGSNTANRVTWKGYHVLTSASQASPFTVGNFIAGNSWIPSTGVPFTSGL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02499 514 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 173 IPR035513 -
Pste6g02499 514 NCBIfam pectinesterase inhibitor domain 1 173 IPR006501 GO:0004857
Pste6g02499 514 SUPERFAMILY Pectin lyase-like 202 513 IPR011050 -
Pste6g02499 514 SMART PMEI_2 25 171 IPR006501 GO:0004857
Pste6g02499 514 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Pste6g02499 514 CDD PMEI-like_3 32 173 - -
Pste6g02499 514 PANTHER PECTINESTERASE 17 504 - -
Pste6g02499 514 FunFam Pectinesterase 202 514 - -
Pste6g02499 514 Gene3D - 202 514 IPR012334 -
Pste6g02499 514 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 174 IPR035513 -
Pste6g02499 514 Pfam Pectinesterase 208 500 IPR000070 GO:0030599|GO:0042545
Pste6g02499 514 Pfam Plant invertase/pectin methylesterase inhibitor 29 171 IPR006501 GO:0004857
Pste6g02499 514 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02499 Pste-Chr6 12338481 12342795 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02499 8 514 Carbohydrate Esterase AT2G45220 67.583 0.0 731