Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02496 CTAGCGAAACCAGAAACCATGACAGGTTTTCGCTTGCTCCTAACACTATTTATTCCTTTCCTTCTATTCTCTTTTGTATATAGTTATTCTTACAATGATGTTAAGGTTTGGTGCAACCAAACCCCAAACCCTCAACCATGTGAGTATTTGTTGACCAATAACCCCTCCTATCAATACAAACCCATCGAGCAAAAATTTGATTTCTTCAAACTTTCATTGCAACTTGCTCAAGAGCGTGCACTCAAAGGCCATGCAAATACTATCTCACTTGGCCCAAAATGCCGTAACTCACGTGAAAAAGTTGCTTGGGCTGATTGTGTTGAGCTTTATGACCAAACTATTCGGAAACTCAATGAAACCTTAGACTCCAACACCAAGTTCTCCCAAGTTGATGCCCAAACATGGCTCAGCACAGCTCTCACCAATCTTGAGACATGCAAAGCTGGGTTCTACGAGCTTGGTGTTCAAGACTATGTTCTCCCTTTGATGTCCAACAATGTCACTAAGTTGTTGAGCAACACCTTGGCTCTTAACAAAGTTCAATATCAACAACCAGTTTACAAAGATGGATTCCCAACATGGGTGAAGCCTGGTGATAGAAAGTTATTGCAAGCTTCTTCACCTGCTTCTAGAGCCAACGTGGTGGTAGCAAAAGATGGATCTGGAAGGTTCACAACAGTAAGTGCAGCTGTAAATGCTGCTCCAAAGAGTGGAAGTAGAAGGTATGTGATATATGTGAAGGCAGGGGTATACAATGAACAAGTTGAGATAAAAGCAAAGAATATAATGCTGCTTGGAGATGGTATAGGAAAGACCATTATCACAGGTAGCAAAAGTGTTGGAGGTGGCACCACAACCTTCCGTTCAGCCACTGTTGCTGTAGTTGGGGAAGGATTTATTGCTCAAGGTATCACATTTAGGAACACTGCTGGTGCAAAAAATCATCAAGCTGTAGCATTGCGTTCTGGATCAGACTTGTCAGTGTTTTACAAATGCAGTTTTGAGGGTTACCAAGATACACTATACGTCCACTCTGAGAGGCAATTCTATAGGGAATGTGACATTTATGGCACAGTTGACTTCATATTTGGAAATGCTGCTGTTGTGTTGCAAAACTGTAACATATTTGCAAGAAACCCTCCAAACAAAGTGAACACAATCACTGCTCAGGGCCGAACAGATCCAAACCAAAACACAGGAATTTCCATTCACAATTGTAGAGTGACAGCGGCCTCTGATTTGAGAGCAGTGCAAAGCTCAGTGAGGACATATCTTGGAAGGCCATGGAAGCAATATTCAAGAACAGTATTCATGAAGACATATCTTGATGGTTTGATAAATCCATCGGGTTGGATGGAATGGAGTGGTAACTTTGCATTGAACACACTTTATTATGGAGAGTACATGAACACTGGTCCAGGTTCTTCTACTGCTAGACGAGTTAGGTGGCGAGGGTATCGTGTGATAACCAGTGCTTCTGAGGCCTCAAAATTCAGCGTTGCAAATTTCATTGCTGGAAACTCATGGTTACCTGCCACCAGAGTGCCTTTTACTCCAACTCTGTAA 1566 0.4221 LAKPETMTGFRLLLTLFIPFLLFSFVYSYSYNDVKVWCNQTPNPQPCEYLLTNNPSYQYKPIEQKFDFFKLSLQLAQERALKGHANTISLGPKCRNSREKVAWADCVELYDQTIRKLNETLDSNTKFSQVDAQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVQYQQPVYKDGFPTWVKPGDRKLLQASSPASRANVVVAKDGSGRFTTVSAAVNAAPKSGSRRYVIYVKAGVYNEQVEIKAKNIMLLGDGIGKTIITGSKSVGGGTTTFRSATVAVVGEGFIAQGITFRNTAGAKNHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVTAASDLRAVQSSVRTYLGRPWKQYSRTVFMKTYLDGLINPSGWMEWSGNFALNTLYYGEYMNTGPGSSTARRVRWRGYRVITSASEASKFSVANFIAGNSWLPATRVPFTPTL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02496 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 180 IPR035513 -
Pste6g02496 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 180 IPR035513 -
Pste6g02496 521 SMART complete 246 424 IPR006633 -
Pste6g02496 521 FunFam Pectinesterase 29 180 - -
Pste6g02496 521 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Pste6g02496 521 Pfam Plant invertase/pectin methylesterase inhibitor 34 177 IPR006501 GO:0004857
Pste6g02496 521 CDD PMEI-like_3 37 179 - -
Pste6g02496 521 Pfam Pectinesterase 213 507 IPR000070 GO:0030599|GO:0042545
Pste6g02496 521 FunFam Pectinesterase 207 521 - -
Pste6g02496 521 PANTHER PECTINESTERASE 21 511 - -
Pste6g02496 521 SMART PMEI_2 29 177 IPR006501 GO:0004857
Pste6g02496 521 SUPERFAMILY Pectin lyase-like 207 520 IPR011050 -
Pste6g02496 521 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
Pste6g02496 521 NCBIfam pectinesterase inhibitor domain 13 179 IPR006501 GO:0004857
Pste6g02496 521 Gene3D - 208 521 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02496 Pste-Chr6 12311087 12312878 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02496 7 521 Carbohydrate Esterase AT2G45220 67.954 0.0 729