Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02489 ATGACAGCTTTTCCCTGCTTGTTCTTCCTAACACTGATTGTTCATTTTCTACTCTCTTGTTACGTCTCTAGTTATTCTTACAATGATGTTAAGGTTTGGTGCAACCAAACCCCAAACCCTCAACCGTGTGAGTATTTATTGAGAAACAACCCCTCTCACCAATACAAACCCATCAAGCAAAAGTCTGATTTCTTTAAGCTTTCAGTGCAACTTGCTCAAGAACGTGCTCTCAATGGCCATGCAAACACACTCTCACTTGGCCCAAAGTGCCGTAACCAACGTGAAACAGCTGCTTGGGCTGATTGCGTTGAGCTTTATGAGAAAACCATTCGAAAACTGAACAAAACCTTAGACTCAAACACCAAGTGGTCCCAAGTTGATACCCAAACATGGCTTAGCACGGCTCTGACCAACCTGGAGACATGCAAAGCAGGGTTCTACGAGCTTGGAGTTGAAGACTATGTTCTGCCTTTGATGTCCAACAATGTCACTAAGTTGTTGAGCAACACCTTGGCACTTAACAAAGTTCAATATGAAGAGGAAGAGCCAAGTTACAAAGATGGGTTCCCAAAATGGGTGAAGGCTGGAGATAGAAAGTTGTTGCAAGCTTCTTCTGCAGCTTCTAAGGCCAACGTAGTGGTGGCAAAAGATGGGTCTGGAAAGTACACAACTGTGAGTGAAGCCGTAAATGCTGCACCAAAGAGTAGCAGTGGAAGGTATGTGATATATGTGAAGGGTGGTGTGTACAATGAGCAAGTTGAGATAAGAGCAAACAACATAATGTTGGTGGGAGATGGTATTGGAAGGACCATAATCACAGGTAGCAAAAGCGTTGGAGGGGGCGCCACAACATTCCGTTCAGCCACTGTTGCTGTTGTTGGAGATGGGTTTATAGCACAAGGCATCACTTTCAGAAACACTGCTGGAGCAGCAAACCACCAAGCTGTGGCACTGCGTTCAGGATCAGACCTATCAGTGTTTTATAGATGCAGCTTTGAGGGTTACCAAGACACGCTGTATGTGTATTCAGATAGACAATTCTACAGAGAATGTGACATATATGGCACAGTTGACTTCATATTTGGTAATGCTGCTGTGGTGTTCCAAAACTGTAACCTATATTGTAGAAACCCTCCAAACAAAGTGAACACGGTGACTGCTCAAGGAAGAACGGATCCAAACCAGAACACAGGGATTTCGATTCACAATTCAAAGGTGACAGCAGCCTCAGATTTGGAAGGGTCAGTGAGGACATACCTAGGAAGGCCATGGCAACAATATTCAACAACAGTATTCATGAAGACATATCTTGATGGTTTGATAAATCCACAGGGTTGGATGGAATGGAGTGGTAACTTTGCATTAAACACATTGTATTATGGAGAGTACATGAACACAGGACCAGGTTCATCAACTTCAAACAGGGTTAAATGGTCAGGATATCATGTCATCACAACTGCTGCTGAAGCCTCTAAATTCACCGTTGCTAATTTCATTTCTGGAAACTCTTGGTTGCCCGCCACCACTGTGCCTTTCACCTCCTCTCTTTAA 1551 0.4378 MTAFPCLFFLTLIVHFLLSCYVSSYSYNDVKVWCNQTPNPQPCEYLLRNNPSHQYKPIKQKSDFFKLSVQLAQERALNGHANTLSLGPKCRNQRETAAWADCVELYEKTIRKLNKTLDSNTKWSQVDTQTWLSTALTNLETCKAGFYELGVEDYVLPLMSNNVTKLLSNTLALNKVQYEEEEPSYKDGFPKWVKAGDRKLLQASSAASKANVVVAKDGSGKYTTVSEAVNAAPKSSSGRYVIYVKGGVYNEQVEIRANNIMLVGDGIGRTIITGSKSVGGGATTFRSATVAVVGDGFIAQGITFRNTAGAANHQAVALRSGSDLSVFYRCSFEGYQDTLYVYSDRQFYRECDIYGTVDFIFGNAAVVFQNCNLYCRNPPNKVNTVTAQGRTDPNQNTGISIHNSKVTAASDLEGSVRTYLGRPWQQYSTTVFMKTYLDGLINPQGWMEWSGNFALNTLYYGEYMNTGPGSSTSNRVKWSGYHVITTAAEASKFTVANFISGNSWLPATTVPFTSSL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02489 516 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Pste6g02489 516 Pfam Pectinesterase 211 502 IPR000070 GO:0030599|GO:0042545
Pste6g02489 516 NCBIfam pectinesterase inhibitor domain 10 175 IPR006501 GO:0004857
Pste6g02489 516 CDD PMEI-like_3 33 175 - -
Pste6g02489 516 PANTHER PECTINESTERASE 16 508 - -
Pste6g02489 516 SMART PMEI_2 25 173 IPR006501 GO:0004857
Pste6g02489 516 SUPERFAMILY Pectin lyase-like 205 513 IPR011050 -
Pste6g02489 516 ProSitePatterns Pectinesterase signature 1. 236 255 IPR018040 -
Pste6g02489 516 Pfam Plant invertase/pectin methylesterase inhibitor 30 173 IPR006501 GO:0004857
Pste6g02489 516 FunFam Pectinesterase 25 176 - -
Pste6g02489 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 176 IPR035513 -
Pste6g02489 516 FunFam Pectinesterase 205 516 - -
Pste6g02489 516 Gene3D - 205 516 IPR012334 -
Pste6g02489 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02489 Pste-Chr6 12273610 12275249 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02489 1 516 Carbohydrate Esterase AT2G45220 65.318 0.0 708