Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02485 CTTGTCCAAGAAGCCATCAATTTTCTTAACTCAATAATCTCTGGCTCTGTTACTTACTTTATGTTGAGTTTCTTCTTCTTAGAGCCATTGGTTTTACTACCTTTTCGATTCAGATGTTCCTCAACGGTGGTTCCTCCTTCACCGGAAGTTTCCATCAGCGGTGGAGCTGAGTTAGAAAAAAGAGAAAAACGAAATTAAGGGCAGGGTTTGATTCCTCAATTGAACAGTGAGCTTCAGTTATTGTTCCTTTTTCTGCAACCAATGGATGGTGAACCGGAAAACACCCTCTCTTGTGCTAACTGTGGCAAACCTGCCAAACTTCAGTGTCCAAAATGCTTGGAATTGAAGCTTCCTCGAGAAGGTTCTGCCTTCTGCTCTCAGGAATGTTTCAAGTCTTCATGGAGCTCACACAAATCTGTGCATCTGAAGGCAAAACTAACCTCACCTAGCACACAAAATTCAGACTTAGTTGGTAAAGGCTGGTTATATTGTTTGAAGGGAGGACAGGCTCGAACTCCAAAGCTTCCTCACTTTGATTGGACTGGATGGCTGCGGCCGTATCCCATTTCTATTAAACGGAATGTCCCAGATCAAATTGCTAAACCGGATTGGGCTGATGATGGAATTCCCAAAATTGAGCCAAATAGTGTTCTGCAGTACACTGTTGAGGTCAAAACACCAGATCAAATTGAGAGAATGAGGGAAACTTGTCGGATTGGGAGGGAAGTCTTGGATGCAGCTGCTCGGATTATTCAACCCGGTGTGATGACTGATGAGATTGACAGAGTTGTTCATGAGGCTACTATAGCTGCAGGAGGATATCCATCACCTCTCAATTACCATTTCTTCCCTAAATCTTGCTGCACGTCAGTTAATGAAGTAATCTGCCATGGAATTCCTGATGCAAGGAAGCTTGAGGATGGTGACATTGTAAATGTTGATGTCTCTGTGTACTATAAAGGTGTTCATGCTGATCTCAATGAAACGTACTTTGTGGGAAATGTTGATAAAGAGGCTCACCAACTAGTAAAATGCACATATGAGTGCCTGGAGAAGGCAATATCCATTGTTAAACCTGGGGTACGATTCCGTGAAATTGGTGAAGTTGTTACTCGTCATGCTTCAATGTCTGGCTTCTCAGTGGTAAAATCGCTTTGTGGTCATGGAATTGGAGAGCTCTTCCATTGTGCACCAGACATTCCTCATTATGCAAAAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAGACCTTTACAATTGAACCAATGATCAATGCTGGTGTCTGGCGTGATCGAATGTGGCCTGATGGATGGTCTATTGTTACAGCAGATGGTAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACAGAGACTGGTGTTGAAGTTTTAACAGGGCGGTTGCAAACATCACCCAAGGTTTTTCCTTGGTTAAGTTCATAATTGGGTGAATCACATGGAGACAGATGCGGGCAGTGTTTAAATATCATACAATCAATAGACAAAATTTCTTTGTTATGTTAATATATTTCTCTGGTTGCCTCTTTTAGTATTATATTTGTAACTTGTAAGTTATAGTAAAAAACAGAAGCAAAATTCAATTGAGTTTAAGTGGAAAATATGATTGATG 1633 0.4133 MDGEPENTLSCANCGKPAKLQCPKCLELKLPREGSAFCSQECFKSSWSSHKSVHLKAKLTSPSTQNSDLVGKGWLYCLKGGQARTPKLPHFDWTGWLRPYPISIKRNVPDQIAKPDWADDGIPKIEPNSVLQYTVEVKTPDQIERMRETCRIGREVLDAAARIIQPGVMTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVSVYYKGVHADLNETYFVGNVDKEAHQLVKCTYECLEKAISIVKPGVRFREIGEVVTRHASMSGFSVVKSLCGHGIGELFHCAPDIPHYAKNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWSIVTADGKRSAQFEHTLLVTETGVEVLTGRLQTSPKVFPWLSS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02485 394 PANTHER METHIONINE AMINOPEPTIDASE 10 381 - -
Pste6g02485 394 Hamap Methionine aminopeptidase [map]. 135 381 IPR002467 GO:0006508|GO:0070006
Pste6g02485 394 CDD MetAP1 143 379 IPR002467 GO:0006508|GO:0070006
Pste6g02485 394 Pfam zf-MYND-like zinc finger, mRNA-binding 12 55 IPR031615 -
Pste6g02485 394 SUPERFAMILY HIT/MYND zinc finger-like 9 52 - -
Pste6g02485 394 PRINTS Methionine aminopeptidase-1 signature 292 304 IPR001714 -
Pste6g02485 394 PRINTS Methionine aminopeptidase-1 signature 323 335 IPR001714 -
Pste6g02485 394 PRINTS Methionine aminopeptidase-1 signature 200 213 IPR001714 -
Pste6g02485 394 PRINTS Methionine aminopeptidase-1 signature 222 238 IPR001714 -
Pste6g02485 394 NCBIfam methionine aminopeptidase, type I 136 380 IPR002467 GO:0006508|GO:0070006
Pste6g02485 394 Gene3D Creatinase/methionine aminopeptidase superfamily 91 391 IPR036005 -
Pste6g02485 394 FunFam Methionine aminopeptidase 91 387 - -
Pste6g02485 394 Gene3D - 2 58 - -
Pste6g02485 394 Pfam Metallopeptidase family M24 144 372 IPR000994 -
Pste6g02485 394 SUPERFAMILY Creatinase/aminopeptidase 91 380 IPR036005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02485 Pste-Chr6 12246257 12253547 Dispersed