Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02482 ATGGCACAACTCAACCTCATATTGCTAGCCATTTTTCTCTCTCTCATGGTTTCAATTCTTGCCACCCCAGTTGAGTCATCATCATTGACAAAGCACAAAAACTCCCAAACAATGACCTACATAGAGTCCTCTTGCAATGGCACCCTTTATCCAAATCTATGCATTCGTTGCTTGGCCAAATATGCCAAATCCACAATAAATGGTCCACAACACTTGGCCCAATATGCCTTGTCAGTGAGCCTCTCTAGAGCAGTCCACACAAGAGGGTACCTTTTGAAAGTGGCCAAGGAACTCAAGGGAAACAAAAGGGAGTACCCAATTGTGAAAGATTGTGTGAACCAAATCACAGATAGTGTTGACCAACTTAGCCAAGCCATGAAAGAACTTCGCAGGTTGAACCAACGTGGCTCCACTATCGATGATGACATGTTGTGGCACATAAGCAATGTTGAGACATGGGTCAGCACTGCCTTAACAGATGCTAGTGCTTGTGTGTACTCATTCCCGGGTCATAGGATGAGTAAGAGAATGGCTGCTATTAAGGTTAAGGCTATGAACGTAGCAGAAGTTACTAGTAATTCACTTTTCTTGTTTCATAAGTATGCATCTAGGTACAGAAAAGCAGAAGCTATAACCACCAAGAAGCCATAG 651 0.4316 MAQLNLILLAIFLSLMVSILATPVESSSLTKHKNSQTMTYIESSCNGTLYPNLCIRCLAKYAKSTINGPQHLAQYALSVSLSRAVHTRGYLLKVAKELKGNKREYPIVKDCVNQITDSVDQLSQAMKELRRLNQRGSTIDDDMLWHISNVETWVSTALTDASACVYSFPGHRMSKRMAAIKVKAMNVAEVTSNSLFLFHKYASRYRKAEAITTKKP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02482 216 Coils Coil 112 135 - -
Pste6g02482 216 SMART PMEI_2 36 197 IPR006501 GO:0004857
Pste6g02482 216 FunFam Pectinesterase inhibitor 3 36 202 - -
Pste6g02482 216 Pfam Plant invertase/pectin methylesterase inhibitor 40 195 IPR006501 GO:0004857
Pste6g02482 216 NCBIfam pectinesterase inhibitor domain 13 201 IPR006501 GO:0004857
Pste6g02482 216 CDD PMEI-like_3 43 203 - -
Pste6g02482 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 201 IPR035513 -
Pste6g02482 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 195 - -
Pste6g02482 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02482 Pste-Chr6 12240778 12241428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02482 41 195 Carbohydrate Esterase AT1G53830 22.930 9.42e-09 53.1