Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02477 atggaaatagggactgtagcatggatttccttcgtcattatgctcatagttttctgtacttcctctcttgctctctcccaggatggactggcgttgttggaaatcaaaagcactttgaatgatactaagaatgttctgagcaactggcaagactttgatgattctccttgtgcatggactggcatctcttgtcatcctggtgatgaacaaagagttcgctcaataaatctgccattcatgcaacttggaggaattatttctcccagcattggtaaactcagcagactacagagactggctcttcatcagaacagcttgcacggaaccattcctaacgagcttaccaattgtactgagctcagagcgctggatttatcaagcaactcattaaaaggttctataccttcctccattagccgcctctcacatttgcatattctgaacttgtctaccaatttcttttccggtgaaattcctgacattggagtattaagcacctttgacaagaactcgtttcttggcaatttggatctttgcgggaggcaagtccaaaagcaatgtcggacatcacttggtttccctgtggtgctaccacatgctgaaatccctaccaaaaggccttcacattacatgaaggcggtgttaattggtgcaatggcaactatgggccttgcacttatcataatcctttcattcctctggagtcgtttgttatcaaagaaggaacgagcagcaaagagatacacagaagtcaagaaacaagttgatccagaagcaggcacaaaacttattaccttccatggtgatctgccgtacacatcctctgaaatcattgagaagcttgagtctcttgatgaagacgatatggtaggatcaggaggatttggtactgtttaccggatggtcatgaatgactgtggtacatttgctgttaaacggatcgatcgaagttgtgaagggtctaatcaagtatttgaaagggaattagagatcttagggagcatcaagcacataaatttagtaaatctgcgtggttactgcaggctcccttcttcaaggcttcttatctatgactatttggccttgggcagcttagatgatctcttgcatgaaaatgctcaacaaagtcgactactgaattggagtgatcgcctaaagatagctcttggttctgcccaaggtttggcatacttgcaccatgaatgcagcccaaaaattgttcattgtaacctaaaatccagcaacatcctccttgatgaaaacatggagccgcatatttctgattttggtcttgcaaagcttttggttgatgaagaggcccatgttaccacagtagttgctggcacatttggttatttggcaccagagtatctacaaagtgggagagcaactgagaagtcagatgtatatagttttggagttctattgctggaacttgtaactggaaagaggcctacagatccttcctttgtaaaaagaggtttaaatgttgttggttggacaaatatgttactgcaagaaaatagattggagaacgtggtagacaaaagatgcactgatgcagatgcaggaactcttgaagtaattcttgagctagcagcaagatgcaccgatggaaatgcagatgatcgtccatcaatgaaccaggtgttacagttgttggaacaagaggttatgtctccttgcccaagcgagttttatgagtctcattcggatcactaa 1722 0.0 MEIGTVAWISFVIMLIVFCTSSLALSQDGLALLEIKSTLNDTKNVLSNWQDFDDSPCAWTGISCHPGDEQRVRSINLPFMQLGGIISPSIGKLSRLQRLALHQNSLHGTIPNELTNCTELRALDLSSNSLKGSIPSSISRLSHLHILNLSTNFFSGEIPDIGVLSTFDKNSFLGNLDLCGRQVQKQCRTSLGFPVVLPHAEIPTKRPSHYMKAVLIGAMATMGLALIIILSFLWSRLLSKKERAAKRYTEVKKQVDPEAGTKLITFHGDLPYTSSEIIEKLESLDEDDMVGSGGFGTVYRMVMNDCGTFAVKRIDRSCEGSNQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYLALGSLDDLLHENAQQSRLLNWSDRLKIALGSAQGLAYLHHECSPKIVHCNLKSSNILLDENMEPHISDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWTNMLLQENRLENVVDKRCTDADAGTLEVILELAARCTDGNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02477 573 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pste6g02477 573 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Pste6g02477 573 SUPERFAMILY L domain-like 25 194 - -
Pste6g02477 573 Gene3D Transferase(Phosphotransferase) domain 1 360 564 - -
Pste6g02477 573 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 184 - -
Pste6g02477 573 Gene3D Phosphorylase Kinase; domain 1 244 359 - -
Pste6g02477 573 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 360 566 - -
Pste6g02477 573 Pfam Protein kinase domain 287 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02477 573 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 47 157 - -
Pste6g02477 573 SUPERFAMILY Protein kinase-like (PK-like) 267 555 IPR011009 -
Pste6g02477 573 Gene3D Ribonuclease Inhibitor 25 189 IPR032675 -
Pste6g02477 573 ProSiteProfiles Protein kinase domain profile. 284 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02477 Pste-Chr6 12221977 12227151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02477 7 563 Receptor kinase-like Gene Family AT2G35620 45.955 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pste6g02477 Pkinase 5.8e-46 CL0016