Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02451 CATGGCACCTTCGTCTAATTCCTCGTTCATAAATGAGGAACGAAAAGCTTTGCTCGAAAGTGGTTGGTGGAATGATTACCGAAATATCTCACACCATTGTGAGTGGTATGGTATCTTGTGTAATGAAGCAGGAAGTGTTATTCACATTTATATGGATATTCCACCACCCAAAGAATTGCGCCTGATTCAGAATCTGAAGGTGACTGCCTTTTCAAATTTATACTCTCTGGATTTATATGGAATGGGTCTTACTGGAAACATTCCTCTTGAAATATGCACCTTTACAAACCTTAGTGCACTTTACCTAAACCATAATCATCTTCAAGGTTCAATACCTGTCCAACTTGGGAATTTGACACGATTAAAATATTTGTCTTTTTATAATAATTCACTAACAGGTTTCATCCCTTCCACCTTCAGAAAATTGGTCAATTTGACCTCTATCTTACTTTCTTTCAACCACCTTGAAGGTCCTATACCAATAGGACTGTGGAATTTGACAGAATTGCTGGACGTTGATTTCTCCAACAATTTATTGACAGGTGAAATCCCTTCTTCTTTGGGCCAATTGAAGAATTTGTTATCTCTCCACCTTGATTCAAACAAACTTGAAGGTACCATCACAAATCAAGCACTTCTTAAAGACTTAAATCTATCACACAACCACTTTTTGTTCAATACCATCATGAAAAGCAATCAGTCTAGTTCAATACCGGTGCAACTAGGGAATTTAACACAACTAGAGAATTTGGCTCTTAAGGATAATTCTCTAACAGGTTTAATCCCTTCTGCTTTAAGTCAATTGATCAATTTAAAAAATCTCAATCTTCATTTGAACCAACTTGAAGGTCTAATCCCAAGTACTTTGGGTCAAATGGAGAACTTGACAAGTTTTTGTCTTGATTTTAACCATATTACTGGTCCCATCCCAAGAGAATTAGGAAACTTGAGACTTTTAAAATACTTAAATTTGTCTCACAACTCCCTTTTTGGTTCAATACCATTAGAGATTGCAAATGCCATCAGTCTCGTGGAAGTAGACCTTTCCCACAACAACCTTACAGGATCTATCCTATCTCCAATCCTAAAATGTCCCTATGTCGAAAAGGTGGATTTAAGCTACAATTTCTTGAATGGGAGTATCACTTCCGAAATCACTTGTGTTGAAAACCTTAACCTCAGCCATAATTTTCTTAATGGTATTATTCCACCTATTTTTGGAATCTATTCTGTACTCCATAAGTTGGATCTTAGTTACAACAATCTCACGGGTAAACTATACAAGGATCTTGCACATTTACCATACATTAACCTTTCATACAATTCCTTTGACTTCTCCTCAGATCTTGACTTAAAGTTGAAGACACCGGACTATTGTTATTTTGCAAAAGACACATTAATTAGTTACCACATGCCAAATTTCACATCCTGCCACTTTCTCTACCAAACCAATCCGCCACAAACTAGAAATAGCAAGGCTTTCATGTTAATTGCTCTTCCCATAGTTGGGTTCATTCTTTTGGTATTTCTTTCAACAGTATATTTCACTAGATCTACATTTAACAGCAAACTCAAAGGAATGTTAACAAAAAATGGAGACTTGTTTTCTATATGGAACTATGACGGTAAAATTGCATTTGATGACATCATTAAGGCAACTGAAGACTTTGACATAAAGTACTGTATTGGAACAGGTGGATATGGCAGTGTGTACAGAGCACAATTGCCCGGCAGTGGCAACATTGTTGCATTAAAAAAACTTCATCAAATGGAATCACAGAATCCATCTTTTGATAGGAGTTTTCGCAATGATGTCAAGATGTTAACAGAAATCCGTCATAAAAACATTGTAAGGCTTCATGGATATTGCCTTCACAACCGATATATGTTTCTAATTTATCAATACATGGAAAGAGGTAGCTTGTTTTATGTCTTGAATAATGATGTCGAAGCTGAGGAGTTGAATTGGACTAAGAGGGTGACTATCATTAAAGGAATGGCACAAGCTCTATCATACATGCATCATGATTGTAATCCACCAATTATTCATCGGGATGTAACAAGTAGCAATGTTCTGTTAAACTCAAAATTAGAGGCTTTTGTCTCAGATTTTGGCACAGCTAGACTCCTTGACCCTGATTCTTCAAATCAAACCTTGGTAGTTTGCACATATGGCTATATTGCCCCAGAGCTTGCCTATACATTGACTGTGACAGAAAAATGTGATGTTTATAGTTTTGGAGTAGTAGCTTTGGAAACATTAATGGGAAGGCATCCTGGAGAGCTAATCTCATCTTTATCAAACTCATCCACTCAACACATTTTATTAAAGGATCTCTTGGATTCACGTCTTCTTCTTCCTGTCTTGCCAAAAGAAGCTCAAGATATAGTGCATGTGGTAACACTAGCATTGGCATGCTTGTGTTCAAAACCAAAGTCTAGACCGTCAATGCAACAAGTGGCTCAAGAACTGTGTTCTTCCAAACCACCCTCACCTTTGCCTTTTCCTGAAATTTCTATTAATCAGTTGATGACT 2536 0.3679 MAPSSNSSFINEERKALLESGWWNDYRNISHHCEWYGILCNEAGSVIHIYMDIPPPKELRLIQNLKVTAFSNLYSLDLYGMGLTGNIPLEICTFTNLSALYLNHNHLQGSIPVQLGNLTRLKYLSFYNNSLTGFIPSTFRKLVNLTSILLSFNHLEGPIPIGLWNLTELLDVDFSNNLLTGEIPSSLGQLKNLLSLHLDSNKLEGTITNQALLKDLNLSHNHFLFNTIMKSNQSSSIPVQLGNLTQLENLALKDNSLTGLIPSALSQLINLKNLNLHLNQLEGLIPSTLGQMENLTSFCLDFNHITGPIPRELGNLRLLKYLNLSHNSLFGSIPLEIANAISLVEVDLSHNNLTGSILSPILKCPYVEKVDLSYNFLNGSITSEITCVENLNLSHNFLNGIIPPIFGIYSVLHKLDLSYNNLTGKLYKDLAHLPYINLSYNSFDFSSDLDLKLKTPDYCYFAKDTLISYHMPNFTSCHFLYQTNPPQTRNSKAFMLIALPIVGFILLVFLSTVYFTRSTFNSKLKGMLTKNGDLFSIWNYDGKIAFDDIIKATEDFDIKYCIGTGGYGSVYRAQLPGSGNIVALKKLHQMESQNPSFDRSFRNDVKMLTEIRHKNIVRLHGYCLHNRYMFLIYQYMERGSLFYVLNNDVEAEELNWTKRVTIIKGMAQALSYMHHDCNPPIIHRDVTSSNVLLNSKLEAFVSDFGTARLLDPDSSNQTLVVCTYGYIAPELAYTLTVTEKCDVYSFGVVALETLMGRHPGELISSLSNSSTQHILLKDLLDSRLLLPVLPKEAQDIVHVVTLALACLCSKPKSRPSMQQVAQELCSSKPPSPLPFPEISINQLMT 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02451 845 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 224 454 - -
Pste6g02451 845 Pfam Protein kinase domain 560 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02451 845 PANTHER LEUCINE RICH REPEAT KINASE 2 230 831 - -
Pste6g02451 845 SUPERFAMILY L domain-like 23 224 - -
Pste6g02451 845 FunFam Nuclear pore complex protein NUP107 6 161 - -
Pste6g02451 845 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Pste6g02451 845 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Pste6g02451 845 SMART LRR_typ_2 268 291 IPR003591 -
Pste6g02451 845 SMART LRR_typ_2 316 340 IPR003591 -
Pste6g02451 845 SMART LRR_typ_2 244 267 IPR003591 -
Pste6g02451 845 SMART LRR_typ_2 142 166 IPR003591 -
Pste6g02451 845 SMART LRR_typ_2 94 117 IPR003591 -
Pste6g02451 845 SMART LRR_typ_2 118 141 IPR003591 -
Pste6g02451 845 SMART LRR_typ_2 190 214 IPR003591 -
Pste6g02451 845 FunFam Leucine-rich repeat receptor protein kinase MSP1 520 635 - -
Pste6g02451 845 Gene3D Ribonuclease Inhibitor 6 142 IPR032675 -
Pste6g02451 845 Gene3D Ribonuclease Inhibitor 143 210 IPR032675 -
Pste6g02451 845 ProSiteProfiles Protein kinase domain profile. 556 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02451 845 SUPERFAMILY L domain-like 230 444 - -
Pste6g02451 845 FunFam MDIS1-interacting receptor like kinase 2 636 830 - -
Pste6g02451 845 Gene3D Transferase(Phosphotransferase) domain 1 636 830 - -
Pste6g02451 845 ProSitePatterns Tyrosine protein kinases specific active-site signature. 681 693 IPR008266 GO:0004672|GO:0006468
Pste6g02451 845 Gene3D Phosphorylase Kinase; domain 1 519 635 - -
Pste6g02451 845 SUPERFAMILY Protein kinase-like (PK-like) 542 824 IPR011009 -
Pste6g02451 845 ProSitePatterns Protein kinases ATP-binding region signature. 562 585 IPR017441 GO:0005524
Pste6g02451 845 Gene3D Ribonuclease Inhibitor 211 452 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02451 Pste-Chr6 12077150 12080050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02451 66 729 Receptor kinase-like Gene Family AT4G08850 34.910 1.87e-127 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste6g02451 Pkinase 1.3e-44 CL0016