Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02447 atggggaactgcaacgcgtgcctgagagatgaggcgggagagaggagcagaggtggaaagaagaaaacgaaaacgaaaacgaaaacgaacccgtacgccgaagagatacagagggaggggagcgtggcgatacgcgtgctgaaggacgtgacgtcacggagcctgatcggagacaagtacgtggtaggtcgggagctgggtcggggggagttcgggataacgtacctgtgcacggaccgggaaaccaagcagcagctggcctgcaagtccatctccaagcgcaagctcaggaccgccgtggacgtggaagacgtccgccgagaggtgtcgatcatgtccagcctgccggaccaccctaacgtcgtcaagctcaaagccacttatgaggaccaagataacgtccatctcgtgatggagctctgcgccggtggagagctgtttgaccggatcgtcgcccggggccactacagcgagcgtgctgccgcccaccttgccctaaccattgccgaggttgtcagcatgtgtcactccaatggcgtcatgcatcgcgacctcaagcccgagaatttcctctttgccagtatgaaggagaactctcttctcaaggccattgattttggactctccgtctttttcaagcctggggagaggttttccgagattgtaggcagtccttattacatggccccggaggttttgagacgcaactatggccctgaggtcgatgtttggagtgctggcgtcattctttatattctcttgtgtggggttcctcccttttgggccggtactcactcttcactttctctgccttctccactatttcattcctactcaccttattcatcttttcgtctctcatctcctctagaggatgaacgaggcgtcgctttggccattctcaggggagtcatcgacttcaaaagggaaccctggcctcagatttcagatactgctaagagccttgtgcgccagatgttggagcctgatcctaaaaagcgcttgactgctcaacaggtcctcgagcattcctggttgcaaaatgcaaagaaagcttcgaatgttccattgggagatattgtgaggacaaggcttagacagttctctgtcatgaatagattcaaaaagagagcacttcgggttattgcagaacatttgtctgttgaagaggtagaaataatcaaagacatgtttacattgatggatacggacaaagatggcaaagtaacatatgaagaactgaaggctgggttacggaaagttggttcacaattggctgaaccggagataaagatgttgatggaagtggctgatgttgaccggaatggagtacttgactatggagagtttgtagccgtgacaattcacttgcaaagaatggagaatgatgagcatttccgcaaagcattcatgtattttgacaaagatgggagtgggtatatcgagctaggtgagctagagaaagcattatcagatgagtcgggagaaactgatattgttgtaataaatgacatcatgcgtgaagttgacactgacaaggacggtcgcattagttatgaagagtttgtggccatgatgaaaactggaactgactggagaaaagcatctagacagtattcaagggagagattcaagagcttgagcataaatttgatgaaggatggctcacttcaacttcatgatggtattagtggtcaagctataatggtttga 1713 0.0 MGNCNACLRDEAGERSRGGKKKTKTKTKTNPYAEEIQREGSVAIRVLKDVTSRSLIGDKYVVGRELGRGEFGITYLCTDRETKQQLACKSISKRKLRTAVDVEDVRREVSIMSSLPDHPNVVKLKATYEDQDNVHLVMELCAGGELFDRIVARGHYSERAAAHLALTIAEVVSMCHSNGVMHRDLKPENFLFASMKENSLLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLRRNYGPEVDVWSAGVILYILLCGVPPFWAGTHSSLSLPSPLFHSYSPYSSFRLSSPLEDERGVALAILRGVIDFKREPWPQISDTAKSLVRQMLEPDPKKRLTAQQVLEHSWLQNAKKASNVPLGDIVRTRLRQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDKDGKVTYEELKAGLRKVGSQLAEPEIKMLMEVADVDRNGVLDYGEFVAVTIHLQRMENDEHFRKAFMYFDKDGSGYIELGELEKALSDESGETDIVVINDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDGISGQAIMV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02447 570 Gene3D Phosphorylase Kinase; domain 1 61 145 - -
Pste6g02447 570 Gene3D - 358 530 - -
Pste6g02447 570 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Pste6g02447 570 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
Pste6g02447 570 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Pste6g02447 570 SMART serkin_6 60 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02447 570 FunFam Calcium-dependent protein kinase 7 355 530 - -
Pste6g02447 570 Pfam Protein kinase domain 60 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02447 570 PANTHER SERINE/THREONINE-PROTEIN KINASE 52 522 - -
Pste6g02447 570 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Pste6g02447 570 ProSiteProfiles Protein kinase domain profile. 60 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02447 570 SUPERFAMILY Protein kinase-like (PK-like) 56 354 IPR011009 -
Pste6g02447 570 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Pste6g02447 570 Pfam EF-hand domain pair 464 527 IPR002048 GO:0005509
Pste6g02447 570 Pfam EF-hand domain pair 394 453 IPR002048 GO:0005509
Pste6g02447 570 SUPERFAMILY EF-hand 374 553 IPR011992 -
Pste6g02447 570 CDD STKc_CAMK 59 345 - -
Pste6g02447 570 FunFam Maternal embryonic leucine zipper kinase 52 271 - -
Pste6g02447 570 ProSitePatterns EF-hand calcium-binding domain. 402 414 IPR018247 -
Pste6g02447 570 SMART efh_1 429 457 IPR002048 GO:0005509
Pste6g02447 570 SMART efh_1 501 529 IPR002048 GO:0005509
Pste6g02447 570 SMART efh_1 393 421 IPR002048 GO:0005509
Pste6g02447 570 SMART efh_1 465 493 IPR002048 GO:0005509
Pste6g02447 570 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Pste6g02447 570 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Pste6g02447 570 Gene3D Transferase(Phosphotransferase) domain 1 146 357 - -
Pste6g02447 570 CDD EFh 465 527 IPR002048 GO:0005509
Pste6g02447 570 FunFam Calcium-dependent protein kinase 1 62 145 - -
Pste6g02447 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Pste6g02447 570 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02447 Pste-Chr6 12031225 12049400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02447 1 570 EF-hand Containing Proteins AT1G74740 72.982 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste6g02447 Pkinase 6.1e-72 CL0016