Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02426 atggggcacaaaaagcgaaaccctgcgccgcgctcgaaacaatccccggcggcttctccggcggcgcaatccggcgtcggcggagccgccaacggtgccacctcgcccgacgctgacgcctgcaatctttccaatcacaatcatagccctagcaagatcgaattggctctacccccatccgagggttccgagtactccacaatcaagctcgaatgcgagcgcgccctcaccaccctccgccgcgggaaccacaccaaggcaatgaagctgttgcgggagatttgtgtcagagaggagggttctcctcactccgccttcgtccaccgagttcacagcctcatgtgcttcaaaacggccacagttatcactgacccgagctccaagcagcggcatttgaagaacgcgctcgagtcggcccggcgtgccgtggagctcatgcccaattccatcgagtacgcccatttccgtgccatggtcatgttggaggctgcgactgaggggaaggattatgaggacgtggtgcacgagtgcgagagggggctcgccattgagaaccccagtgatcctgccaaggagacgttgcatgatgagagcgagcacaaagcttcaacccctgaagataggatagtgcatgttcagaatgagctgaggcaacttattcagaagtcgaatatagcttccttgtcatcttggatgaagaatttgagtaatggggaggagaggtttcggttgattcctataaggagaaccccggaggaccccatggaggtgaggttggttcaaactagaaggcctaatgagatcaagaaggtgaccaagacacccgaggaaaggagaaaggaaattgaagttcgagtggctgctgctaggctgctgcagcaaaagtcagagacgttgcaatcgaccaatgaaggtgatagggatgacaggccattggattcatctgcagggtctgctcagaggattggtgataggaggaggcatggaaatgcgaggaagaatggctttacagccgagaggatgaagcgggtacagtcatattggaactcgattagtatgaatatgaagcaggattttcttagggttaaaatttgtgatcttaaatcacattatggatcttcaaaggatactttgccgaatgatatcttgtcagaaggtttgtcttatgccgaggccaataaaacatggaaattctggccttgctgcaactgtgaagagaagcagtccaacccggattctcacaggcatcatgtcgtgcaggaacacatggggagcctttcttcacaaatgcagagacttctgcctcaaaatgttgatagtgaatggattgagatgattcttaattgttcttggaagcctttggatgtcttagctgcagttagaatgcttgataataaagcaaaatgtcaaaattcatcacttcctgaggatttgtacttggatcatcatactctggactataatgactgttttaaagacggaagcagatgttacattgaaaaggaaggttcaggggacagtcttcgtaattgttcagaagaatgcaacaaccactgtaaaactatggaaaatgatgtaagagaagtcgttgaagaccaagtatctatgggtaatcccattattgattgttggccagtatctgatgaccctgagcgagcaaagctcctagggaaaattcatgccatgtttgagactcttattaggcacaaatgtcttgctgctagtcatcttaacaaggtcatacagtttactatgggtgagatacagggtcttgctgctggttctcaacttctaaatcaaggtgtcgaccaaacaccaatgtgcatatcctttctaggagtctcacaacttaagacaattttccaatttctacaggaaatttctcatgcttgtgggttggccagaaatgctgataaaggtagtagtcccacaaatgatttgcacaatatcagtcaaggtcctgagattaaagacaaaattgtacttgatggagatgcatcttgcctcctactggatgaatgtttactgcaaacacaagtcactgctggtacagctcagggggaagtcttggacgatgtgatcaccccaatctctcctgatggaatttcatgctatagtgatgctttgctatcctggatattttcaagttcacctactggggatcagttgacatcatggctgcgaaccagagaagataagctaaataaaggaaaggaaattgtgcagatgcttgagaaggagttttatcacctacagggcctatgtgataagaagggtgagcgtataagttatgaggaagctctgcaaacagtagaggatctttgccttgaagaaggtaagaagagggaaactgttggtgagtttgtccagcaaagctatgaatctgtcttaagaaagcgtagggaagagctcattgagagtgagaatgatatgatgtatgtcagcaacaggtttgagttggatgctatatcaaatgttttgcaagaagcagaagcaaggaatgttaatcaatttggctatgaggaaacttatgctggtgtgacttctcagttatgtgacttggagtctggtgaagaagatgagtggagaatgaaggattacttgcatcaaatggatggttgtatagaaaatgctattcagaaactgaaagagcatttatctatagagcttagcaaaattgatgcccgaataattagaagtgtaacagagatgcagcaactggaattcaagcttgggcctgtttctgctaatgattatcgagcaatattagtgcctctagtgaagtcgtacctaagggctcttttggaagatttagctgagaaggatgcaagagagaagtctgatgctgcaagtgaagcgtttttggctgaacttgctcttgattccaagaaggctgttaagggtggaaatgagagctcaagacatgtcgagaaaacaaaagataagaagaagaataaagatcacagaaaagcaagagatttgaaggccacaagcggtcattcgcagttcttacatgaatctacaattcctgattcaaatctagttgcacctgaaaatgacttcccagatcatggggctgtttctatgaatgatgatgacttggaacaacttgaagaggaatttagacgtaaaattgagctagaagaggaggaaaaaaagcttgaagaaacattggaatttcaacgaagaatagaaaatgaagccaaacagaagcacctagcagagcaacagaaaaaatcctctggtttatactcggaggaagtggtggacaatcttcaagattgtcaaacatgggcagatgctgatccacctgttgcacaaggacatgttggagtacctgtgcaggaccagctggtgaaggagaatggatcacggagcaatctggatggtgtgcttacacccacagcaaatggttccattgttaattattcacatcagtcaaaagttaaacaaccagatttgcctaatggagttgttccagagactggtctacctttctctgatcggcgtgcaggaaaaaaacataaaaggaagaattcttccagactggttgatggaaagtctgaatctgtctcattggaaaaagagaatattgaggatacacatactaattatcaactgagagagcaattcaaatttaataacaatcaagatgttaataatgtgtgtgaaaacaatggatcaaaggtgaagagagagttgcaagtaaaagatgtggaggaggaaagataccaagctgatcttaaaatggctgtacgccaaagcctggacacatatcaagctcgtggaaattatccgtcaagagcctcttcccaagtagatggtgtggattgtccacctgtggaagactcaactaataatgtgaatggggctactttgcttggtactggactgaagaatgaagtgggtgaatataattgttttctcaatgttattatacagtttcggatggaatttcttggcagatcaagatcagagcatgaacatgtgggtaatccttgtgttgtctgtgcgttgtatgaaatatttatggcactggtcacagcatcaaaggattcaaggagagaagcagttgcacctacatccctgcgaatagctctaagcaacctgtatcctcacagtagtttcttccaggaggctcagatgaacgatgcttctgaggtactggcagtgatatttgactgccttcatcaatcatttactcgtggctcaggtgtttctgatgcggaatcagctgaaagcaactgcatgggatcttgggattgtgcaaatggtagttgtatagcacattcactttttggaatgaacatttttgaacaaatgaactgctatcactgtagtcttgaatccagacatatgaaatatacttccttctttcacaatataaatgccagcgccctccggacaatgaaggtaatgtttgctgaaagttcctttgataagcttctgaatcttgtggagatgaaccatcagttggcttgtgatctagaagctggtggctgtggcaagcccaaccacatccatcactttctttcaacaccaccccatgtttttatgacagtcctaggttggcaaaatacaagtgagagtgctgatgatataacagcgactctgacagccctgagcaccaagatagatatcagcgtcctttatcgtggtttagatcctaaatgcatccataacttagtgtcagtggtttgctactatggccaacattatcattgctttgcttatagccatgaccatgaacaatggattatgtatgatgacaagactgtcaaggtaattggtggatgggcggatgttgttacaatgtgtgaaagagggcatctacaaccacagcttcttgtcacttgggctgtaaaaggaatgtcgtttactgatcttctggaacgtgctgaatggcagactttgtgcaacagtaaattgaggagcttccatcctttgggtccacaacactatgcagcagatgttaacggtagctttgagtga 4992 0.0 MGHKKRNPAPRSKQSPAASPAAQSGVGGAANGATSPDADACNLSNHNHSPSKIELALPPSEGSEYSTIKLECERALTTLRRGNHTKAMKLLREICVREEGSPHSAFVHRVHSLMCFKTATVITDPSSKQRHLKNALESARRAVELMPNSIEYAHFRAMVMLEAATEGKDYEDVVHECERGLAIENPSDPAKETLHDESEHKASTPEDRIVHVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRTPEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSETLQSTNEGDRDDRPLDSSAGSAQRIGDRRRHGNARKNGFTAERMKRVQSYWNSISMNMKQDFLRVKICDLKSHYGSSKDTLPNDILSEGLSYAEANKTWKFWPCCNCEEKQSNPDSHRHHVVQEHMGSLSSQMQRLLPQNVDSEWIEMILNCSWKPLDVLAAVRMLDNKAKCQNSSLPEDLYLDHHTLDYNDCFKDGSRCYIEKEGSGDSLRNCSEECNNHCKTMENDVREVVEDQVSMGNPIIDCWPVSDDPERAKLLGKIHAMFETLIRHKCLAASHLNKVIQFTMGEIQGLAAGSQLLNQGVDQTPMCISFLGVSQLKTIFQFLQEISHACGLARNADKGSSPTNDLHNISQGPEIKDKIVLDGDASCLLLDECLLQTQVTAGTAQGEVLDDVITPISPDGISCYSDALLSWIFSSSPTGDQLTSWLRTREDKLNKGKEIVQMLEKEFYHLQGLCDKKGERISYEEALQTVEDLCLEEGKKRETVGEFVQQSYESVLRKRREELIESENDMMYVSNRFELDAISNVLQEAEARNVNQFGYEETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGCIENAIQKLKEHLSIELSKIDARIIRSVTEMQQLEFKLGPVSANDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKAVKGGNESSRHVEKTKDKKKNKDHRKARDLKATSGHSQFLHESTIPDSNLVAPENDFPDHGAVSMNDDDLEQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQKHLAEQQKKSSGLYSEEVVDNLQDCQTWADADPPVAQGHVGVPVQDQLVKENGSRSNLDGVLTPTANGSIVNYSHQSKVKQPDLPNGVVPETGLPFSDRRAGKKHKRKNSSRLVDGKSESVSLEKENIEDTHTNYQLREQFKFNNNQDVNNVCENNGSKVKRELQVKDVEEERYQADLKMAVRQSLDTYQARGNYPSRASSQVDGVDCPPVEDSTNNVNGATLLGTGLKNEVGEYNCFLNVIIQFRMEFLGRSRSEHEHVGNPCVVCALYEIFMALVTASKDSRREAVAPTSLRIALSNLYPHSSFFQEAQMNDASEVLAVIFDCLHQSFTRGSGVSDAESAESNCMGSWDCANGSCIAHSLFGMNIFEQMNCYHCSLESRHMKYTSFFHNINASALRTMKVMFAESSFDKLLNLVEMNHQLACDLEAGGCGKPNHIHHFLSTPPHVFMTVLGWQNTSESADDITATLTALSTKIDISVLYRGLDPKCIHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKVIGGWADVVTMCERGHLQPQLLVTWAVKGMSFTDLLERAEWQTLCNSKLRSFHPLGPQHYAADVNGSFE 1663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02426 1663 MobiDBLite consensus disorder prediction 184 204 - -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 1262 1282 - -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 293 338 - -
Pste6g02426 1663 Gene3D Cysteine proteinases 1282 1611 - -
Pste6g02426 1663 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1296 1622 IPR028889 -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 37 51 - -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 301 338 - -
Pste6g02426 1663 SUPERFAMILY Cysteine proteinases 1296 1602 IPR038765 -
Pste6g02426 1663 CDD Peptidase_C19 1380 1596 - -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 1148 1189 - -
Pste6g02426 1663 Pfam Protein of unknown function (DUF629) 343 877 IPR006865 -
Pste6g02426 1663 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1616 - -
Pste6g02426 1663 Coils Coil 1030 1071 - -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 1000 1014 - -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 1 60 - -
Pste6g02426 1663 Pfam Protein of unknown function (DUF627) 74 185 IPR006866 -
Pste6g02426 1663 Pfam Ubiquitin carboxyl-terminal hydrolase 1306 1596 IPR001394 GO:0004843|GO:0016579
Pste6g02426 1663 MobiDBLite consensus disorder prediction 966 1031 - -
Pste6g02426 1663 MobiDBLite consensus disorder prediction 189 204 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02426 68 1617 C2H2 Transcription Factor Family AT3G47890 56.005 0.0 1665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02426 6 11907765 11917708 Pste6g02426 6 11907765 11917708 ECH