Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02414 atgaccctaaagggtggcacaacccaagcctgtgcggcatgtaaacaccagagaagaaaatgcacttctgaatgcgttcttgcgccttacttccctgctgatcaacccaaggtgtttctcaatgttcacaagctatttggagtcagcaacatcgttaagattttgaagatattggagcctaatcagaaaaaaatagccatggattctattattattcaagcaaattatagggataagtatcctgtgcacggctgttgggaggaaatttgtaggttacaataccaaatatgggtagcagaagaagaacttcacgcagtttatcagcagcttgaaatatgcagacaacacgaaggcccttctataccccacgatgtgacttcccagttagaactgggcatgacaccttgtacaaataatgcactcccactttttaatcatcattctcaacaaccacatacttacaatgatactgtgtcacagcagcaacaacattcatactctagcagcaacagcattgattataactccctctatttggattctaaggacaatgtcacaaatcctaatctatggcttcagtatccttatgcaaataacaacagcaattctgtcggaatgcaaactcccttagtttcctctcagccactacccatccaaccaggtggtattgaagattatgatgacatgcctccaatttttgattctgttgatgatagacaatcttatatttattccaaagaagcttatgaatcaagctcagaagaatcattgaaagatatgagaaagtgcactgagcatgtctccgagaatgaattgaagagtgcagctgcatgttttagccttaccagtgtcaactga 858 0.0 MTLKGGTTQACAACKHQRRKCTSECVLAPYFPADQPKVFLNVHKLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWVAEEELHAVYQQLEICRQHEGPSIPHDVTSQLELGMTPCTNNALPLFNHHSQQPHTYNDTVSQQQQHSYSSSNSIDYNSLYLDSKDNVTNPNLWLQYPYANNNSNSVGMQTPLVSSQPLPIQPGGIEDYDDMPPIFDSVDDRQSYIYSKEAYESSSEESLKDMRKCTEHVSENELKSAAACFSLTSVN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02414 285 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Pste6g02414 285 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 165 - -
Pste6g02414 285 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Pste6g02414 285 MobiDBLite consensus disorder prediction 145 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02414 Pste-Chr6 11874693 11879408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02414 1 248 AS2 family AT3G47870 39.474 6.65e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste6g02414 LOB 7e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02414 6 11874693 11879408 Pste6g02414 6 11874693 11879408 ECH