Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02406 atggacgacggcgatccttccctgtcggataaagaggaggggaacgatgaggaagacgtggcgggcgttctgtcgcgaattccaattgtcgatgctcccatactcgtgtttgtttgtttccacaaggcttttcgctccgaactcgatcaccttcgtcgcttggcggaaacggcatcgtcagaggacgagccacaccgttgccgacatataatccttcagcttcaacggaggttccagtttcttaaactagctcttaagtatcattgtgctgcggaagacgaggttatcttccttgcactcgatacacatgtgaaaaatgtcgtatgtacatattcccttgaacataacaccaccagtgacctttttgtgtctatttttcacttcttggatgagctgatcgttcctaaagataatatttccaagctgttccaagaacttgtgtactgcattggtatcttgcaaacctccatctaccaacatatgctgaaagaagaagaacaggttttccccctattgatgcagaaattatctaccaaagaacaggcatcacttgtgtggcaattcatttgtagtgttcctgtactgttgctggaggaagttttgccatggatggtatccttcctttctgcaaataaacaatcagaagtttcccagtgtttaaatgaacttgcaccaatggaaaaggcattgcaagagagtggagaatttcaaggtgttgatggattcctatatatagaaagatcacttgggctgagttattgtaataggaactctgaagaaattgcaagtccaatgaaagtgaatggccaagaaatagaagatgtggccaaccaggttaatgtccttcatctttggcataatgccatcaagaaagatttgaaagaaattctgaaagaactttatctactaagaaaatccagctgttttcagaatttagactcaatacttatccaactaaaattctttgctgatgtcctcatcttctacagcaatgctcagaagaaattctttcatcctgtactgaataaacatgcttatggttggttgtccaagtctattgaacaatttctagagaagctttgccaaaaacttgaatcatttgtgtcaggagtcaacaaacaatttgcttttcaagaaaatgaggtatttcctatctttagaaagaactgcagaaatggaatgcaagagagacttctaagcttgagcctacatatgatgcctctcgggttactaagatgtgttataacttggttttcagtttgcttgtctgaaaaagagtccaggtccattctctattgcataaagaaaggaaacaattcagtcggcaaagctttttcatcacttttacatgagtggttccgcgttggttactcaggtaaaacctcaattgaaaaattcagacaagacttgcaacatattttcaaaagaagatgctcttttttacccgaacaaattaaggaagctcatggattttctttcttaaattctgagaagcagcctcataaagtctctgtgctggattgtttgtcatattcctcctcttctggatccagtaatgtgaacaagtatgagacaccatactccacaggaattaatctgcacatattttttccttccacagttgtgaagttacatcagcatccttcattacatgccaaagaacgttcctctatttcttttcttgacgatccaaaaccaattgacctaatatttttctttcacaaagctatcaagaaagatttggagtacctagttcttggctcagctcagttagaaaaaaatgataagttgcttatggatttccaaaaacgattccatctcataaattttcttcatcaaatccatagtgatgctgaggatgagatagtttttccagccttggaagcaaggggtaaactcaaaaacattagccatgcctatacctttgatcacaaacatgaagttcagcacttcaataaaatatctcatatccttgataagatgtctggattacttctttcagtttctacagttgattcaaatatcaaggaaaaggaaatgctaaagtattaccatttatgcaggaagctgcaagaaatgtgcaaatcaatgcataagaatctttctgatcacataaaccgtgaggaaatagaaatttggccaataattagaaaatttttcacaagtcaggagcaagggaagatcataggatgcatgcttgggagaataagagcagaaatattacaagatatgataccttggctaatggcatctttaacacaggaagaacaacatgttttaatgttcttatggtccatggctactaaacatacaatgtttgatgaatggttaggtgaatggtgggatgggtacagtttaaccaaggtaacagaagggtcaaatgatgccactcttcagcccattgagccactggagattatatccaaatatttatcggaagaaattctaaatgaattacaagaagaatcatctgctaacaaaagcataaatttgtttcagaaggatcatattggtgataatgttgagctgtctaactacaattttgatgaaaaagttaagatgcaagttaaaaagccattcacatgccttaaccgtacatctgaagcttatgggagggttggttcatga 2628 0.0 MDDGDPSLSDKEEGNDEEDVAGVLSRIPIVDAPILVFVCFHKAFRSELDHLRRLAETASSEDEPHRCRHIILQLQRRFQFLKLALKYHCAAEDEVIFLALDTHVKNVVCTYSLEHNTTSDLFVSIFHFLDELIVPKDNISKLFQELVYCIGILQTSIYQHMLKEEEQVFPLLMQKLSTKEQASLVWQFICSVPVLLLEEVLPWMVSFLSANKQSEVSQCLNELAPMEKALQESGEFQGVDGFLYIERSLGLSYCNRNSEEIASPMKVNGQEIEDVANQVNVLHLWHNAIKKDLKEILKELYLLRKSSCFQNLDSILIQLKFFADVLIFYSNAQKKFFHPVLNKHAYGWLSKSIEQFLEKLCQKLESFVSGVNKQFAFQENEVFPIFRKNCRNGMQERLLSLSLHMMPLGLLRCVITWFSVCLSEKESRSILYCIKKGNNSVGKAFSSLLHEWFRVGYSGKTSIEKFRQDLQHIFKRRCSFLPEQIKEAHGFSFLNSEKQPHKVSVLDCLSYSSSSGSSNVNKYETPYSTGINLHIFFPSTVVKLHQHPSLHAKERSSISFLDDPKPIDLIFFFHKAIKKDLEYLVLGSAQLEKNDKLLMDFQKRFHLINFLHQIHSDAEDEIVFPALEARGKLKNISHAYTFDHKHEVQHFNKISHILDKMSGLLLSVSTVDSNIKEKEMLKYYHLCRKLQEMCKSMHKNLSDHINREEIEIWPIIRKFFTSQEQGKIIGCMLGRIRAEILQDMIPWLMASLTQEEQHVLMFLWSMATKHTMFDEWLGEWWDGYSLTKVTEGSNDATLQPIEPLEIISKYLSEEILNELQEESSANKSINLFQKDHIGDNVELSNYNFDEKVKMQVKKPFTCLNRTSEAYGRVGS 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02406 875 Gene3D nmb1532 protein domain like 32 190 - -
Pste6g02406 875 Gene3D nmb1532 protein domain like 562 733 - -
Pste6g02406 875 CDD Hr-like 36 170 - -
Pste6g02406 875 CDD Hr-like 568 714 - -
Pste6g02406 875 Pfam Hemerythrin HHE cation binding domain 41 172 IPR012312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02406 Pste-Chr6 11813353 11832222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02406 32 809 C2H2 Transcription Factor Family AT3G18290 31.663 7.96e-124 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02406 6 11813353 11832222 Pste6g02406 6 11813353 11832222 ECH