Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02393 ATGATGGATTGTGGGGGAAAGATTGGCGGAAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTGCTCATTTTGCTGCAGTGCACAAGGTGTTTGGTGCTAGCAATGCCTCTAAGTTACTCATGAGGATACCAGCACACAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAGGCCATTGCTAGGGCTAGAGACCCCGTTTATGGTTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGCTGAGTTAACCTATGTCCAGGCCCGTCTTGCCACAATGCAGAGATTGCCAATGCAAGTAGCTCCTCTTCTACACCCTCAAAGCTCTTCACCACCAACCCTTCATTCCTCGGATCATTTAGCTTCGAATGCTGATTTGCAAAGTGCCCCTATGCACTTTGATCCTCTGCAACCACACTCACCATCATTAGAGTTAAGCAGCATCGTTTTCAACCAATCAGAACAAATTGAGGATAGGGAACTGCAAGCTTTGGCTCGAGAATTTGTCACCAAATATTTGCCTGGAGTAAGATTCCAGCAATCTAACTCTCCCTGAGGACAAGATAACTTTGCTTGTCATTTTCTTCTAGTTTGATGCCAATGCTTTTGTTAAATCATGTCCTCTAGTGCGTAACTCAATTTGCTGAGAATGTTGCTAACTGCACTACTGGAAGAGTACTATCAAATGTGAAGAATTGTGTAACAAATCCAATTGCTACTTCCGCTTTCTTTGGCAAAGAAATTTTCCATGTTTAGTTGCGGTAATTGAATACGTGGCCAAAATAACTACAATATGATGTAATTTTTCCATCATGCAATATTGTTACATGTTAAAATGGTCTTTTGCTATCCATTGATTCAGAAAATCTAAATGTTCAGAAGTGCTCTAAGCTACCACCAACTTTAAACATGGGGTAAGGAGGCTTAATTAACAAGACGAACGCCAAATATTTTCGTTGTTTCAACTTCAATTCGTAAACTATAACGGACCGAAAATTTAGACATCCTCATGAAACATTCATGCTTTAAACAGGAGAACGTTCT 1109 0.4139 MMDCGGKIGGSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEAIARARDPVYGCVGHLFALQQQAELTYVQARLATMQRLPMQVAPLLHPQSSSPPTLHSSDHLASNADLQSAPMHFDPLQPHSPSLELSSIVFNQSEQIEDRELQALAREFVTKYLPGVRFQQSNSP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02393 206 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Pste6g02393 206 Pfam Lateral organ boundaries (LOB) domain 16 111 IPR004883 -
Pste6g02393 206 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02393 Pste-Chr6 11703114 11708202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02393 14 204 AS2 family AT4G00210 52.381 1.83e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste6g02393 LOB 4.5e-35 No_clan