Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02388 ATGAGTATAAACTCTAGTTGTAGTATAAGTGGTGGAAGTGGTAGTGGAGGAAACAATAGTGGTGGTGGTAGCAGTGGCGGCGGTAGCCCTTGTGGTGCATGCAAGTTTTTGAGGCGAAAGTGCGTGCCCGGTTGCATCTTTGCACCGTACTTTGATTCGGAGCAAGGTGCCACACATTTTGCCGCGGTGCACAAGGTTTTTGGTGCTAGTAACGTTTCCAAGCTACTCCTTAACATTCCGGTACATAAGAGGCTTGATGCTGTGGTCACAATTTGTTATGAGGCACAGGCACGGCTTAGAGACCCTGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAGCAACAGGTGGTGAGTTTACAAGCAGAGCTGTCTTACTTACAAGGGCACCTTGCAACCCTAGAGTTACCCCAACCACCACCACCTTCTTCTCCACAAGCAACCACCATGGCACCTCCAGTGATCTCAATACCTGATCTTCCATCATCAGCCTCTGCCTCTTCAACAATGCCACCCACATATGACCTCTCTTCACTTTTTGATCCCATGGCCCAGACTCCTTCATGGGCCTTGCAGCACAGGCCCATAGAGTCTCGTCAATATGTGGGTAGTGGGCCTGGTGGCACTTCAGCCAGTGGCGGTGATCTTCAAGCATTGGCCCGTGAGCTTTTACATAGACATGGATCTGCCCCAGTTGTCGCATGCTCTAATCCCTCCTCCTCTCACTCCATCTCCAAATGA 741 0.5007 MSINSSCSISGGSGSGGNNSGGGSSGGGSPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPQPPPPSSPQATTMAPPVISIPDLPSSASASSTMPPTYDLSSLFDPMAQTPSWALQHRPIESRQYVGSGPGGTSASGGDLQALARELLHRHGSAPVVACSNPSSSHSISK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02388 246 Pfam Lateral organ boundaries (LOB) domain 30 128 IPR004883 -
Pste6g02388 246 ProSiteProfiles LOB domain profile. 29 131 IPR004883 -
Pste6g02388 246 MobiDBLite consensus disorder prediction 136 171 - -
Pste6g02388 246 PANTHER LOB DOMAIN CONTAINING PROTEIN 26 150 - -
Pste6g02388 246 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02388 Pste-Chr6 11673255 11677762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02388 33 246 AS2 family AT2G45420 61.135 3.94e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste6g02388 LOB 2e-38 No_clan