Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g02373 | CAAAAGTCTGAAGCCCAGAGCCCAGAGCCCAGAGCCCAGTAAGGAAAACGCAAGCCCTCCTTTCTGGAAGAAACGAGCAAACCTCAGTATTCTTCAAAATCAAAGGTTCCCTCTCAGAAAAACACACTCTTTCGAATCAAATCAAATAAAGTAAAATGTCGGTGACTCTGCACACAAACCTAGGCGACATCAAGTGCGAAATCTTCTGCGACGAGGTTCCCAAGACCTCCGAGAATTTCTTAGCGCTAAGTGCAAGTGGTTACTACGATGGGACTATATTTCACCGCAACATTAAGGGTTTTATGATTCAAGGTGGTGACCCAACTGGAACTGGCAAAGGAGGGACCAGTATATGGGGCAAGAAATTTAACGATGAGATAAGAGAGTCTCTGAAGCACAATGCTAGGGGAATATTGGCAATGGCCAACAGTGGGCCAAATACTAATGGAAGCCAATTCTTCATTACTTATGCAAAGCAGCCACATTTAAATGGTCTATACACTGTGTTTGGAAGAGTAATCCATGGGTTTGAAGTTCTTGATCTCATGGAAAAGACTCAAACAGGGGCAGGGGACCGACCACTTGCAGAGATAAGGCTCAATCGTGTAACAATACATGCTAATCCACTTGCTGGATAGCCTCTTGTCTCAACAGTTTTTAATGTAAAATTTAAGCTTAAAGGGGAGGGGAAAGGGAATTCCTATATACTGATTTGAGTAGTTGTTCTTGTTCATAACTACTGATTGTAGCATTTTGATTGATAAAGTAGTAAAATGTATATTGAATTGTCAGATATGCATGGAAATCTATAAAAACATCTTTTTGGATTATAGTCCAAATGCCAA | 845 | 0.4095 | MSVTLHTNLGDIKCEIFCDEVPKTSENFLALSASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILAMANSGPNTNGSQFFITYAKQPHLNGLYTVFGRVIHGFEVLDLMEKTQTGAGDRPLAEIRLNRVTIHANPLAG | 160 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g02373 | 160 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 37 | 54 | IPR020892 | GO:0003755|GO:0006457 | |
| Pste6g02373 | 160 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 2 | 153 | IPR044666 | - | |
| Pste6g02373 | 160 | Gene3D | - | 1 | 160 | IPR029000 | - | |
| Pste6g02373 | 160 | PIRSF | Peptidylpro_ismrse | 1 | 157 | IPR024936 | GO:0003755 | |
| Pste6g02373 | 160 | CDD | Cyclophilin_PPIL3_like | 1 | 153 | - | - | |
| Pste6g02373 | 160 | FunFam | Peptidyl-prolyl cis-trans isomerase | 1 | 160 | - | - | |
| Pste6g02373 | 160 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 3 | 152 | IPR002130 | GO:0000413|GO:0003755 | |
| Pste6g02373 | 160 | SUPERFAMILY | Cyclophilin-like | 1 | 157 | IPR029000 | - | |
| Pste6g02373 | 160 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 42 | 54 | IPR002130 | GO:0000413|GO:0003755 | |
| Pste6g02373 | 160 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 100 | 112 | IPR002130 | GO:0000413|GO:0003755 | |
| Pste6g02373 | 160 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 113 | 128 | IPR002130 | GO:0000413|GO:0003755 | |
| Pste6g02373 | 160 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 85 | 100 | IPR002130 | GO:0000413|GO:0003755 | |
| Pste6g02373 | 160 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 16 | 31 | IPR002130 | GO:0000413|GO:0003755 | |
| Pste6g02373 | 160 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 6 | 153 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g02373 | Pste-Chr6 | 11564363 | 11567144 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g02373 | 3 | 157 | U-box Gene Family | AT5G67530 | 52.258 | 1.37e-53 | 176 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste6g02373 | 6 | 11564363 | 11567144 | Pste6g02373 | 6 | 11564363 | 11567144 | ECH |