Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02371 atggtgtcgacatttgagaagaagaagaacctgacaaagctgataattccgagttgttcttcttcaggaaacccatccccatccatgacaagcccgcaaatcatccaaagcaggtcccactcgttcgtgggcccctcctacgaagaggaggaagaggaatcggaatcggaatcggaatcggtgcctctgtgtctggctcctaagattggaccttctgatttccatattgtgcgtgttatagggcagggttcctttggcaaggtctttctcgtcagacctaagcctcactcttcccatcctcttactcatggactcttcgccatgaaggtcatgagaaaggacaccatcattaagaaaaaccacgtcgattacatgaaagcagagcgtgatattctcactaaagtccttcaccctttcattgttcagctccgtttctctttccaagtctctctctactccctccctttctcgtttctcttcttcatcatttccttatctcatcatcatcatcattttctgcagaccacttctaagttatatttggtcctcgacttcattaatggaggccatctcttctttcatctctaccgccagggtatcttcggtgaggatcaggcaaggctttacactgctgagatagtctctgctgtttcacatcttcacagcaagggcatcgtgcatcgggatcttaaacctgaaaatattctcatggatgctcatggccatgtcatgctaactgattttggactgtccaaagagattgatgaattgggaagatccaattctttttgtgggactgttgaatatatggctcctgaaatcctactgggcaaaggccataacaaggatgcagattggtggagtgttggtattctcttgtatgaaatgctaacagggaaggcaccatttatacacaataaccggaagaaacttcaggagaaaattattaaagagaaggttaaacttccaccattccttaccagtgaagctcactctttgctcaaagggttgctgcaaaaagatccatcaacaaggttaggaaatgggccagatggagatgaccagatcaaaagtcataaatggtttagatcaatcaattggaaaaaattggaggctagagaactggaaccaaagtttaaaccagatgtgtctgggaaagactgtacagctaattttgaccaatgttggaccgcaatgcctgcagatgactcaccagctccgacgcctacagcaggtgaccatttccagggctatacttatgtagcacccaacccttggctttcatctggctcactagactga 1302 0.0 MVSTFEKKKNLTKLIIPSCSSSGNPSPSMTSPQIIQSRSHSFVGPSYEEEEEESESESESVPLCLAPKIGPSDFHIVRVIGQGSFGKVFLVRPKPHSSHPLTHGLFAMKVMRKDTIIKKNHVDYMKAERDILTKVLHPFIVQLRFSFQVSLYSLPFSFLFFIISLSHHHHHFLQTTSKLYLVLDFINGGHLFFHLYRQGIFGEDQARLYTAEIVSAVSHLHSKGIVHRDLKPENILMDAHGHVMLTDFGLSKEIDELGRSNSFCGTVEYMAPEILLGKGHNKDADWWSVGILLYEMLTGKAPFIHNNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLQKDPSTRLGNGPDGDDQIKSHKWFRSINWKKLEARELEPKFKPDVSGKDCTANFDQCWTAMPADDSPAPTPTAGDHFQGYTYVAPNPWLSSGSLD 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02371 433 Gene3D Phosphorylase Kinase; domain 1 169 404 - -
Pste6g02371 433 Pfam Protein kinase domain 74 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02371 433 ProSiteProfiles AGC-kinase C-terminal domain profile. 363 430 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste6g02371 433 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Pste6g02371 433 SMART pkinase_C_6 363 422 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste6g02371 433 ProSiteProfiles Protein kinase domain profile. 74 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02371 433 Gene3D Phosphorylase Kinase; domain 1 30 152 - -
Pste6g02371 433 SMART serkin_6 74 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02371 433 MobiDBLite consensus disorder prediction 16 60 - -
Pste6g02371 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Pste6g02371 433 PANTHER RIBOSOMAL PROTEIN S6 KINASE 49 424 - -
Pste6g02371 433 SUPERFAMILY Protein kinase-like (PK-like) 72 424 IPR011009 -
Pste6g02371 433 FunFam Non-specific serine/threonine protein kinase 186 381 - -
Pste6g02371 433 MobiDBLite consensus disorder prediction 16 43 - -
Pste6g02371 433 Gene3D Transferase(Phosphotransferase) domain 1 186 381 - -
Pste6g02371 433 Pfam Protein kinase C terminal domain 383 420 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02371 Pste-Chr6 11557250 11560989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02371 16 423 AGC Kinase Gene Family AT3G08720 54.157 6.18e-166 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pste6g02371 Pkinase 5e-66 CL0016