Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02364 atgtctgccgcctccaccaccgtagactccgtcgcctccggcgagatcatgctgttcggagtgagagtagtcgtggattccatgaggaagagcgtgagcatgaacaatctctcgcagtacgagcatcctcaagacgccaacaacaaagacgttctcaccgccggttacgcctccgccgatgacgccgttcctcaaaactccggccgccaccgtgagcgagagcggaaacgaggggttccgtggacggaggaagagcacaagctgtttttggttggattgcagaaggtagggaaaggcgactggagaggaatctccaaaaactacgtcaaaacgcgaactcccacgcaggttgccagccatgctcagaagtactttctccgccgaagcaacctcaatcgccgtcgccgtagatccagtctctttgacatcaccaccgacacggtctctgctatcccgatggaagaagaacgggtccagaatgaggagaccctgtctcattcacaacccgtgtgtcctgaaactagcaaaatgagtgggtttccaatgatgccagtatatcagtttggggttggttctggtgtgatttcagtccaaggaatggaagaactcgctctgggacaaggaatggaaagagacaatgtgccaaataagatagccccgagttctagttctgcagttgacccaccgacactgtccctggggctatccttctcttctgaccaaaggcagacgtcatcaagacactctgctttacatgccctacaatgtttcagcaatggagatagcatcattagtgttgcttga 804 0.0 MSAASTTVDSVASGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDANNKDVLTAGYASADDAVPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEERVQNEETLSHSQPVCPETSKMSGFPMMPVYQFGVGSGVISVQGMEELALGQGMERDNVPNKIAPSSSSAVDPPTLSLGLSFSSDQRQTSSRHSALHALQCFSNGDSIISVA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02364 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 129 IPR017930 -
Pste6g02364 267 ProSiteProfiles SANT domain profile. 76 129 IPR017884 -
Pste6g02364 267 NCBIfam myb-like DNA-binding domain, SHAQKYF class 76 127 IPR006447 GO:0003677
Pste6g02364 267 CDD SANT 80 125 IPR001005 -
Pste6g02364 267 MobiDBLite consensus disorder prediction 65 79 - -
Pste6g02364 267 MobiDBLite consensus disorder prediction 59 79 - -
Pste6g02364 267 MobiDBLite consensus disorder prediction 216 239 - -
Pste6g02364 267 SMART sant 77 127 IPR001005 -
Pste6g02364 267 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Pste6g02364 267 FunFam transcription factor MYB1R1 79 130 - -
Pste6g02364 267 SUPERFAMILY Homeodomain-like 75 130 IPR009057 -
Pste6g02364 267 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Pste6g02364 267 PANTHER TRANSCRIPTION FACTOR KUA1 15 216 - -
Pste6g02364 267 Gene3D - 79 131 - -
Pste6g02364 267 MobiDBLite consensus disorder prediction 212 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02364 Pste-Chr6 11527614 11529447 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste6g02364 Myb_DNA-binding 3e-12 CL0123