Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02348 TCCAACCACAATGGAAGCAATGCCAGTGAGAATGGACTACCTTTCACTTCTTCCATTAATCATCTTAGTGTGCTTCAAACTACTCAAATCCTCCAAATATCCCTAGGGCCTTGCCCTTTTCCCATCATAGGAAACATCTTGGAGCTTGGCAACCAACCTCATCAAGCACTTGCAAAACTTTCTAAAATTTATGGTCCTATAATGAGTCTCAAGCTTGGTAACACTACCACCATAGATAGTCCCAGATACTCTCCGAGCACTAGATCATCACATTCTTTCAATGCTTTGGATATTGGTGAGGATGCCTTTACAACTGTACTTAATTCCATATCAAACACTTTCTTTTCAATGGATTTGGCTCATTACACTTCTGATAAGTCTCAAGAGTTTATGCACATCATTTGGGATCCACAAGGTGCACGGAGAAGAATGAGTGGCTATTTTGGAAAGCTAATTGCCTTTTTTGATGGTCTCGTTGAGGAAAGGTTGCGTGTAAGGAGAGTAGAAAATGAATCCAAGGCGGGCAATGATGTGTTAGATTCTATGCTCGAACCTTTGCTTGAAGATGATTCCAAAGTGACCCGTCCTCATATTTCGCATTTGTTTGTGGATTTATTTGTGGCTGGTATAGACACAATATCAAACTCAATAGAATGGGCCATGACTGAGTTGCTACGTAACCCAGAAAAACTCGAAAAGGTTAGGAAGGAGCTTCAACAAGTCATTACCAAAAATGAACAACTTAAAGAATCACATATATCAAAGCTTCCATACTTACAAGCAGTAATCAAAGAAACTTTTCGCCTGCATCCACCCGTTCCAATGTTAGTGCCACGCAAGTCCAAAGTTGATGTTGAACTAAGTGGCTTCATGATACCAAAAAATGTCCAAATTCTAGTTAATATATGGGCTATGGGAAGAGATTCGAGTATTTGGGAAAATCCAAATCAATTTACACCTGAAAGGTTCTTAGAAAATGACATTGATTTTGAAGGCCAAGATTTTGAGCTAATACCCTTTGGAGCGGGAAGAAGGATCTGTCCTGGTTTGCCATTGGCTTCTAGAACTATGTATGTTGTGTTGGCCTCTCTTCTATACAACTACCATTGGAAGCTTATGGATGGACAAAAACCAGAAGATATGGACATGTCTGAGAAATATGGGATAACCTTGCATAAGGCTCAACCTCTCCGAGTCATTCCCATCCAACCATAATATCAAACAAGATTATATTTCTAATCAAATTCTC 1249 0.3947 SNHNGSNASENGLPFTSSINHLSVLQTTQILQISLGPCPFPIIGNILELGNQPHQALAKLSKIYGPIMSLKLGNTTTIDSPRYSPSTRSSHSFNALDIGEDAFTTVLNSISNTFFSMDLAHYTSDKSQEFMHIIWDPQGARRRMSGYFGKLIAFFDGLVEERLRVRRVENESKAGNDVLDSMLEPLLEDDSKVTRPHISHLFVDLFVAGIDTISNSIEWAMTELLRNPEKLEKVRKELQQVITKNEQLKESHISKLPYLQAVIKETFRLHPPVPMLVPRKSKVDVELSGFMIPKNVQILVNIWAMGRDSSIWENPNQFTPERFLENDIDFEGQDFELIPFGAGRRICPGLPLASRTMYVVLASLLYNYHWKLMDGQKPEDMDMSEKYGITLHKAQPLRVIPIQP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02348 404 SUPERFAMILY Cytochrome P450 36 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 FunFam Geraniol 8-hydroxylase 132 400 - -
Pste6g02348 404 Pfam Cytochrome P450 36 78 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 Pfam Cytochrome P450 130 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS E-class P450 group I signature 260 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS E-class P450 group I signature 347 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS E-class P450 group I signature 301 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS E-class P450 group I signature 337 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS P450 superfamily signature 338 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS P450 superfamily signature 261 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS P450 superfamily signature 208 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 Gene3D Cytochrome P450 85 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 Gene3D Cytochrome P450 26 83 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02348 404 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 340 349 IPR017972 GO:0005506|GO:0016705
Pste6g02348 404 Coils Coil 231 251 - -
Pste6g02348 404 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 29 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02348 Pste-Chr6 11413568 11422188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02348 36 91 Cytochrome P450 AT2G45550 50.000 3.66e-10 59.7